Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR1BP28222 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR1BP28222 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR1BP28222 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.3■□□□□ 0.04
HTR1BP28222 AP005019.2-201ENST00000615104 511 ntBASIC15.3■□□□□ 0.04
HTR1BP28222 MIR6775-201ENST00000617557 69 ntBASIC15.3■□□□□ 0.04
HTR1BP28222 BX539320.1-201ENST00000623759 877 ntBASIC15.3■□□□□ 0.04
HTR1BP28222 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.3■□□□□ 0.04
HTR1BP28222 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
HTR1BP28222 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1BP28222 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTR1BP28222 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HTR1BP28222 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HTR1BP28222 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1BP28222 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HTR1BP28222 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HTR1BP28222 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1BP28222 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1BP28222 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.29■□□□□ 0.04
HTR1BP28222 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 C2orf27AP3-201ENST00000434123 579 ntBASIC15.29■□□□□ 0.04
HTR1BP28222 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
HTR1BP28222 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.29■□□□□ 0.04
HTR1BP28222 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HTR1BP28222 CTBP2P5-201ENST00000454986 1264 ntBASIC15.29■□□□□ 0.04
HTR1BP28222 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1BP28222 AC022137.2-201ENST00000503482 481 ntBASIC15.29■□□□□ 0.04
HTR1BP28222 GAPDHP40-201ENST00000505218 1006 ntBASIC15.29■□□□□ 0.04
HTR1BP28222 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.29■□□□□ 0.04
HTR1BP28222 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1BP28222 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.29■□□□□ 0.04
HTR1BP28222 AC025181.2-201ENST00000606994 802 ntBASIC15.29■□□□□ 0.04
HTR1BP28222 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 AL354718.3-201ENST00000616414 581 ntBASIC15.29■□□□□ 0.04
HTR1BP28222 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 CR382287.1-201ENST00000623954 586 ntBASIC15.29■□□□□ 0.04
HTR1BP28222 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 MIR600HG-201ENST00000449175 5984 ntBASIC15.29■□□□□ 0.04
HTR1BP28222 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1BP28222 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1BP28222 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HTR1BP28222 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1BP28222 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR1BP28222 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 SNX18-202ENST00000343017 3140 ntBASIC15.28■□□□□ 0.04
HTR1BP28222 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 PDIA3P1-201ENST00000471856 1510 ntBASIC15.28■□□□□ 0.04
HTR1BP28222 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HTR1BP28222 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HTR1BP28222 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1BP28222 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.28■□□□□ 0.04
HTR1BP28222 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HTR1BP28222 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 AC016694.1-201ENST00000434179 700 ntBASIC15.28■□□□□ 0.04
HTR1BP28222 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
HTR1BP28222 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.28■□□□□ 0.04
HTR1BP28222 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.28■□□□□ 0.04
HTR1BP28222 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.28■□□□□ 0.04
HTR1BP28222 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.28■□□□□ 0.04
HTR1BP28222 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR1BP28222 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms