Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 AC092658.1-201ENST00000505836 891 ntBASIC13.18□□□□□ -0.3
CD40P25942 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40P25942 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40P25942 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40P25942 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40P25942 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.18□□□□□ -0.3
CD40P25942 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40P25942 AC010328.2-201ENST00000597698 1111 ntBASIC13.18□□□□□ -0.3
CD40P25942 AL603764.1-201ENST00000636452 321 ntBASIC13.18□□□□□ -0.3
CD40P25942 AC006453.4-201ENST00000636949 1252 ntBASIC13.18□□□□□ -0.3
CD40P25942 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40P25942 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CD40P25942 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CD40P25942 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CD40P25942 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.18□□□□□ -0.3
CD40P25942 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CD40P25942 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CD40P25942 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CD40P25942 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.18□□□□□ -0.3
CD40P25942 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.17□□□□□ -0.3
CD40P25942 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.17□□□□□ -0.3
CD40P25942 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CD40P25942 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CD40P25942 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
CD40P25942 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.17□□□□□ -0.3
CD40P25942 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.17□□□□□ -0.3
CD40P25942 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.17□□□□□ -0.3
CD40P25942 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.17□□□□□ -0.3
CD40P25942 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 EIF3FP3-201ENST00000434851 1086 ntBASIC13.17□□□□□ -0.3
CD40P25942 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.17□□□□□ -0.3
CD40P25942 AL355994.2-201ENST00000447882 704 ntBASIC13.17□□□□□ -0.3
CD40P25942 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.17□□□□□ -0.3
CD40P25942 DUX4L45-201ENST00000566406 1057 ntBASIC13.17□□□□□ -0.3
CD40P25942 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.17□□□□□ -0.3
CD40P25942 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.17□□□□□ -0.3
CD40P25942 ECM1P1-201ENST00000604092 1279 ntBASIC13.17□□□□□ -0.3
CD40P25942 ENPP7P14-201ENST00000621765 1040 ntBASIC13.17□□□□□ -0.3
CD40P25942 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.17□□□□□ -0.3
CD40P25942 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
CD40P25942 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 AL161772.1-201ENST00000610494 4412 ntBASIC13.17□□□□□ -0.3
CD40P25942 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CD40P25942 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.17□□□□□ -0.3
CD40P25942 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40P25942 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CD40P25942 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CD40P25942 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CD40P25942 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40P25942 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms