Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL035633.1-201ENST00000406139 838 ntBASIC14.39□□□□□ -0.11
CHMP24386 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.39□□□□□ -0.11
CHMP24386 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.39□□□□□ -0.11
CHMP24386 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.39□□□□□ -0.11
CHMP24386 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CHMP24386 AC044860.1-202ENST00000559481 777 ntBASIC14.39□□□□□ -0.11
CHMP24386 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 AC025048.3-201ENST00000590609 569 ntBASIC14.39□□□□□ -0.11
CHMP24386 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.39□□□□□ -0.11
CHMP24386 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 AL450472.2-201ENST00000603663 1156 ntBASIC14.39□□□□□ -0.11
CHMP24386 AC074044.1-201ENST00000609673 707 ntBASIC14.39□□□□□ -0.11
CHMP24386 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 AC005702.4-201ENST00000618393 416 ntBASIC14.39□□□□□ -0.11
CHMP24386 AC004840.1-201ENST00000636359 365 ntBASIC14.39□□□□□ -0.11
CHMP24386 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP24386 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHMP24386 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CHMP24386 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP24386 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CHMP24386 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CHMP24386 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.39□□□□□ -0.11
CHMP24386 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.39□□□□□ -0.11
CHMP24386 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.39□□□□□ -0.11
CHMP24386 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.39□□□□□ -0.11
CHMP24386 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHMP24386 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.39□□□□□ -0.11
CHMP24386 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CHMP24386 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP24386 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.38□□□□□ -0.11
CHMP24386 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP24386 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP24386 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP24386 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CHMP24386 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 MIR661-201ENST00000384842 89 ntBASIC14.38□□□□□ -0.11
CHMP24386 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 AZGP1P1-201ENST00000411909 902 ntBASIC14.38□□□□□ -0.11
CHMP24386 PIN1P1-201ENST00000412108 996 ntBASIC14.38□□□□□ -0.11
CHMP24386 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.38□□□□□ -0.11
CHMP24386 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP24386 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.38□□□□□ -0.11
CHMP24386 PHKG1P2-201ENST00000457537 863 ntBASIC14.38□□□□□ -0.11
CHMP24386 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP24386 SERBP1P5-201ENST00000510079 1181 ntBASIC14.38□□□□□ -0.11
CHMP24386 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CHMP24386 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.38□□□□□ -0.11
CHMP24386 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.38□□□□□ -0.11
CHMP24386 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CHMP24386 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.38□□□□□ -0.11
CHMP24386 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
CHMP24386 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP24386 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.38□□□□□ -0.11
CHMP24386 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CHMP24386 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
CHMP24386 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CHMP24386 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP24386 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP24386 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP24386 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 Z97205.2-201ENST00000564697 1639 ntBASIC14.37□□□□□ -0.11
CHMP24386 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms