Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
MMP8P22894 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.07■□□□□ 0.16
MMP8P22894 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.07■□□□□ 0.16
MMP8P22894 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP8P22894 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
MMP8P22894 AC133539.2-201ENST00000604757 467 ntBASIC16.07■□□□□ 0.16
MMP8P22894 AC008494.3-201ENST00000606615 944 ntBASIC16.07■□□□□ 0.16
MMP8P22894 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP8P22894 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP8P22894 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MMP8P22894 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 AC007292.2-201ENST00000593524 1812 ntBASIC16.07■□□□□ 0.16
MMP8P22894 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MMP8P22894 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
MMP8P22894 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP8P22894 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP8P22894 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MMP8P22894 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 KRT8P14-201ENST00000414254 1442 ntBASIC16.06■□□□□ 0.16
MMP8P22894 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP8P22894 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MMP8P22894 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MMP8P22894 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
MMP8P22894 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MMP8P22894 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.06■□□□□ 0.16
MMP8P22894 AP001582.1-201ENST00000525856 295 ntBASIC16.06■□□□□ 0.16
MMP8P22894 AC190387.1-201ENST00000551683 408 ntBASIC16.06■□□□□ 0.16
MMP8P22894 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.06■□□□□ 0.16
MMP8P22894 AC005252.2-201ENST00000624630 1141 ntBASIC16.06■□□□□ 0.16
MMP8P22894 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MMP8P22894 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
MMP8P22894 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP8P22894 LINC00552-201ENST00000625151 2579 ntBASIC16.06■□□□□ 0.16
MMP8P22894 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MMP8P22894 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
MMP8P22894 AC232323.1-201ENST00000540724 2099 ntBASIC16.06■□□□□ 0.16
MMP8P22894 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP8P22894 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP8P22894 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP8P22894 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
MMP8P22894 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MMP8P22894 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
MMP8P22894 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MMP8P22894 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
MMP8P22894 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP8P22894 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MMP8P22894 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 251.6 ms