Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.14□□□□□ -0.47
NF1P21359 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC12.14□□□□□ -0.47
NF1P21359 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC12.14□□□□□ -0.47
NF1P21359 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC12.14□□□□□ -0.47
NF1P21359 MIR6893-201ENST00000613458 69 ntBASIC12.14□□□□□ -0.47
NF1P21359 AL157414.3-201ENST00000624276 1954 ntBASIC12.14□□□□□ -0.47
NF1P21359 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.13□□□□□ -0.47
NF1P21359 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.13□□□□□ -0.47
NF1P21359 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.13□□□□□ -0.47
NF1P21359 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 AC106827.1-201ENST00000366454 431 ntBASIC12.13□□□□□ -0.47
NF1P21359 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.13□□□□□ -0.47
NF1P21359 HNRNPA1P25-201ENST00000422644 937 ntBASIC12.13□□□□□ -0.47
NF1P21359 AP000358.1-201ENST00000456260 156 ntBASIC12.13□□□□□ -0.47
NF1P21359 ORAOV1P1-201ENST00000503108 395 ntBASIC12.13□□□□□ -0.47
NF1P21359 CISD2-202ENST00000503643 808 ntTSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 AC020922.4-201ENST00000621389 339 ntBASIC12.13□□□□□ -0.47
NF1P21359 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 MST1L-201ENST00000442552 2185 ntBASIC12.13□□□□□ -0.47
NF1P21359 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 REXO1L5P-201ENST00000622260 2098 ntBASIC12.13□□□□□ -0.47
NF1P21359 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 KRT18P9-201ENST00000604826 1300 ntBASIC12.13□□□□□ -0.47
NF1P21359 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 AC010141.1-201ENST00000411585 623 ntBASIC12.13□□□□□ -0.47
NF1P21359 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC12.13□□□□□ -0.47
NF1P21359 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.13□□□□□ -0.47
NF1P21359 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC12.13□□□□□ -0.47
NF1P21359 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.13□□□□□ -0.47
NF1P21359 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NF1P21359 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.12□□□□□ -0.47
NF1P21359 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NF1P21359 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 AL121949.3-201ENST00000406684 385 ntBASIC12.12□□□□□ -0.47
NF1P21359 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 RPL3P5-201ENST00000441645 1232 ntBASIC12.12□□□□□ -0.47
NF1P21359 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 RHOQP2-201ENST00000449922 579 ntBASIC12.12□□□□□ -0.47
NF1P21359 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.12□□□□□ -0.47
NF1P21359 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.12□□□□□ -0.47
NF1P21359 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.12□□□□□ -0.47
NF1P21359 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 LRRC59-203ENST00000576448 1531 ntBASIC12.12□□□□□ -0.47
NF1P21359 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms