Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN3P20807 AL592309.1-201ENST00000443127 649 ntBASIC14.81□□□□□ -0.04
CAPN3P20807 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN3P20807 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.81□□□□□ -0.04
CAPN3P20807 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.81□□□□□ -0.04
CAPN3P20807 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.81□□□□□ -0.04
CAPN3P20807 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.81□□□□□ -0.04
CAPN3P20807 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.81□□□□□ -0.04
CAPN3P20807 AC105021.1-202ENST00000570572 669 ntBASIC14.81□□□□□ -0.04
CAPN3P20807 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
CAPN3P20807 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.81□□□□□ -0.04
CAPN3P20807 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CAPN3P20807 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CAPN3P20807 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN3P20807 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CAPN3P20807 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 AL161772.1-201ENST00000610494 4412 ntBASIC14.81□□□□□ -0.04
CAPN3P20807 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN3P20807 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN3P20807 AC027601.5-201ENST00000624065 2482 ntBASIC14.81□□□□□ -0.04
CAPN3P20807 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN3P20807 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CAPN3P20807 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 AP001267.2-201ENST00000532619 2086 ntBASIC14.8□□□□□ -0.04
CAPN3P20807 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.8□□□□□ -0.04
CAPN3P20807 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN3P20807 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN3P20807 KRT18P32-201ENST00000424695 1287 ntBASIC14.8□□□□□ -0.04
CAPN3P20807 CRB3P1-201ENST00000449338 276 ntBASIC14.8□□□□□ -0.04
CAPN3P20807 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.8□□□□□ -0.04
CAPN3P20807 AC125807.1-201ENST00000483097 614 ntBASIC14.8□□□□□ -0.04
CAPN3P20807 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN3P20807 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN3P20807 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN3P20807 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.8□□□□□ -0.04
CAPN3P20807 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN3P20807 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CAPN3P20807 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CAPN3P20807 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN3P20807 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.8□□□□□ -0.04
CAPN3P20807 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CAPN3P20807 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 AC113367.3-201ENST00000508316 1912 ntBASIC14.8□□□□□ -0.04
CAPN3P20807 REXO1L4P-201ENST00000605109 1937 ntBASIC14.8□□□□□ -0.04
CAPN3P20807 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.8□□□□□ -0.04
CAPN3P20807 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 AC006504.5-208ENST00000588784 2401 ntBASIC14.8□□□□□ -0.04
CAPN3P20807 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN3P20807 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
CAPN3P20807 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CAPN3P20807 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CAPN3P20807 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CAPN3P20807 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms