Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.71■□□□□ 0.1
HMGA1P17096 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMGA1P17096 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMGA1P17096 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.7■□□□□ 0.1
HMGA1P17096 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGA1P17096 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGA1P17096 AC023090.2-201ENST00000625182 2110 ntBASIC15.7■□□□□ 0.1
HMGA1P17096 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HMGA1P17096 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMGA1P17096 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HMGA1P17096 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGA1P17096 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGA1P17096 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HMGA1P17096 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGA1P17096 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.7■□□□□ 0.1
HMGA1P17096 FNTAP2-201ENST00000430308 634 ntBASIC15.7■□□□□ 0.1
HMGA1P17096 NKAIN1P1-201ENST00000435754 582 ntBASIC15.7■□□□□ 0.1
HMGA1P17096 SCARNA20.5-201ENST00000516991 142 ntBASIC15.7■□□□□ 0.1
HMGA1P17096 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.7■□□□□ 0.1
HMGA1P17096 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGA1P17096 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.7■□□□□ 0.1
HMGA1P17096 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGA1P17096 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGA1P17096 AC022748.3-201ENST00000621828 275 ntBASIC15.7■□□□□ 0.1
HMGA1P17096 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HMGA1P17096 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGA1P17096 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGA1P17096 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGA1P17096 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HMGA1P17096 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HMGA1P17096 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HMGA1P17096 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HMGA1P17096 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HMGA1P17096 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGA1P17096 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
HMGA1P17096 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGA1P17096 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGA1P17096 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGA1P17096 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGA1P17096 SERPINA13P-202ENST00000478994 924 ntBASIC15.69■□□□□ 0.1
HMGA1P17096 HIST2H2BC-201ENST00000498492 580 ntBASIC15.69■□□□□ 0.1
HMGA1P17096 AC044849.1-201ENST00000519737 1188 ntBASIC15.69■□□□□ 0.1
HMGA1P17096 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGA1P17096 ACTG1P17-201ENST00000558391 1119 ntBASIC15.69■□□□□ 0.1
HMGA1P17096 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGA1P17096 AC020914.3-201ENST00000594712 304 ntBASIC15.69■□□□□ 0.1
HMGA1P17096 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
HMGA1P17096 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGA1P17096 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGA1P17096 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HMGA1P17096 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
HMGA1P17096 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGA1P17096 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGA1P17096 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGA1P17096 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HMGA1P17096 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGA1P17096 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA1P17096 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA1P17096 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGA1P17096 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA1P17096 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGA1P17096 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA1P17096 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA1P17096 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA1P17096 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGA1P17096 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms