Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.07■□□□□ 0.32
RARBP10826 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARBP10826 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RARBP10826 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARBP10826 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RARBP10826 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.06■□□□□ 0.32
RARBP10826 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
RARBP10826 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.06■□□□□ 0.32
RARBP10826 AP003680.1-201ENST00000598970 3660 ntBASIC17.06■□□□□ 0.32
RARBP10826 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RARBP10826 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.06■□□□□ 0.32
RARBP10826 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.06■□□□□ 0.32
RARBP10826 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.06■□□□□ 0.32
RARBP10826 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.06■□□□□ 0.32
RARBP10826 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 DPM3-202ENST00000368399 517 ntBASIC17.06■□□□□ 0.32
RARBP10826 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RARBP10826 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.06■□□□□ 0.32
RARBP10826 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.06■□□□□ 0.32
RARBP10826 AC024681.1-201ENST00000521917 487 ntBASIC17.06■□□□□ 0.32
RARBP10826 AC013355.1-201ENST00000562625 723 ntBASIC17.06■□□□□ 0.32
RARBP10826 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.06■□□□□ 0.32
RARBP10826 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.06■□□□□ 0.32
RARBP10826 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.06■□□□□ 0.32
RARBP10826 U62317.3-201ENST00000608319 855 ntBASIC17.06■□□□□ 0.32
RARBP10826 AC138466.3-201ENST00000619983 221 ntBASIC17.06■□□□□ 0.32
RARBP10826 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.06■□□□□ 0.32
RARBP10826 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.06■□□□□ 0.32
RARBP10826 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.06■□□□□ 0.32
RARBP10826 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 AL513523.2-202ENST00000427283 2040 ntBASIC17.06■□□□□ 0.32
RARBP10826 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RARBP10826 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.05■□□□□ 0.32
RARBP10826 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
RARBP10826 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RARBP10826 AC055811.4-201ENST00000624039 1754 ntBASIC17.05■□□□□ 0.32
RARBP10826 AC008132.1-202ENST00000342005 1389 ntBASIC17.05■□□□□ 0.32
RARBP10826 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RARBP10826 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RARBP10826 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.05■□□□□ 0.32
RARBP10826 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
RARBP10826 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 MIR33B-201ENST00000385104 96 ntBASIC17.05■□□□□ 0.32
RARBP10826 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.05■□□□□ 0.32
RARBP10826 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.05■□□□□ 0.32
RARBP10826 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.05■□□□□ 0.32
RARBP10826 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.05■□□□□ 0.32
RARBP10826 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.05■□□□□ 0.32
RARBP10826 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.05■□□□□ 0.32
RARBP10826 AC026740.1-201ENST00000607068 791 ntBASIC17.05■□□□□ 0.32
RARBP10826 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RARBP10826 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RARBP10826 MTHFR-217ENST00000641820 1569 ntBASIC17.05■□□□□ 0.32
RARBP10826 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
RARBP10826 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RARBP10826 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.05■□□□□ 0.32
RARBP10826 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RARBP10826 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.04■□□□□ 0.32
RARBP10826 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.04■□□□□ 0.32
RARBP10826 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms