Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.86■□□□□ 0.13
CD48P09326 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.86■□□□□ 0.13
CD48P09326 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.86■□□□□ 0.13
CD48P09326 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 TSPY16P-201ENST00000449843 468 ntBASIC15.86■□□□□ 0.13
CD48P09326 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.86■□□□□ 0.13
CD48P09326 AC093004.1-201ENST00000508850 424 ntBASIC15.86■□□□□ 0.13
CD48P09326 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.86■□□□□ 0.13
CD48P09326 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.86■□□□□ 0.13
CD48P09326 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.86■□□□□ 0.13
CD48P09326 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.86■□□□□ 0.13
CD48P09326 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.86■□□□□ 0.13
CD48P09326 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.86■□□□□ 0.13
CD48P09326 AJ011932.1-201ENST00000621707 465 ntBASIC15.86■□□□□ 0.13
CD48P09326 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.86■□□□□ 0.13
CD48P09326 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.86■□□□□ 0.13
CD48P09326 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CD48P09326 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.86■□□□□ 0.13
CD48P09326 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 SNX18-202ENST00000343017 3140 ntBASIC15.85■□□□□ 0.13
CD48P09326 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD48P09326 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.85■□□□□ 0.13
CD48P09326 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 HLA-K-203ENST00000430151 1046 ntBASIC15.85■□□□□ 0.13
CD48P09326 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.85■□□□□ 0.13
CD48P09326 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.85■□□□□ 0.13
CD48P09326 AC055876.2-201ENST00000531834 546 ntBASIC15.85■□□□□ 0.13
CD48P09326 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.85■□□□□ 0.13
CD48P09326 CHCHD2P3-201ENST00000603038 451 ntBASIC15.85■□□□□ 0.13
CD48P09326 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 AC009118.2-201ENST00000613275 655 ntBASIC15.85■□□□□ 0.13
CD48P09326 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CD48P09326 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 AC140479.7-201ENST00000636301 2332 ntBASIC15.85■□□□□ 0.13
CD48P09326 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
CD48P09326 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD48P09326 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.85■□□□□ 0.13
CD48P09326 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD48P09326 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CD48P09326 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CD48P09326 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
CD48P09326 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
CD48P09326 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CD48P09326 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms