Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.41■□□□□ 0.54
APPP05067 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
APPP05067 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
APPP05067 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
APPP05067 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.41■□□□□ 0.54
APPP05067 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.41■□□□□ 0.54
APPP05067 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
APPP05067 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.41■□□□□ 0.54
APPP05067 ACTG1P3-201ENST00000431775 1114 ntBASIC18.41■□□□□ 0.54
APPP05067 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.41■□□□□ 0.54
APPP05067 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.41■□□□□ 0.54
APPP05067 AC093433.1-201ENST00000458048 571 ntBASIC18.41■□□□□ 0.54
APPP05067 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.41■□□□□ 0.54
APPP05067 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 AP001063.1-201ENST00000568332 529 ntBASIC18.41■□□□□ 0.54
APPP05067 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.41■□□□□ 0.54
APPP05067 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.41■□□□□ 0.54
APPP05067 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
APPP05067 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
APPP05067 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.41■□□□□ 0.54
APPP05067 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
APPP05067 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.4■□□□□ 0.54
APPP05067 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
APPP05067 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.4■□□□□ 0.54
APPP05067 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.4■□□□□ 0.54
APPP05067 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
APPP05067 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
APPP05067 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.4■□□□□ 0.54
APPP05067 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
APPP05067 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.4■□□□□ 0.54
APPP05067 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.4■□□□□ 0.54
APPP05067 PTP4A1P2-201ENST00000546033 454 ntBASIC18.4■□□□□ 0.54
APPP05067 AC009486.1-201ENST00000569860 813 ntBASIC18.4■□□□□ 0.54
APPP05067 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
APPP05067 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
APPP05067 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.4■□□□□ 0.54
APPP05067 RPSAP52-203ENST00000622976 1023 ntBASIC18.4■□□□□ 0.54
APPP05067 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.4■□□□□ 0.54
APPP05067 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.4■□□□□ 0.54
APPP05067 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.4■□□□□ 0.54
APPP05067 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
APPP05067 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.4■□□□□ 0.54
APPP05067 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 AC148477.4-201ENST00000613430 1793 ntBASIC18.4■□□□□ 0.54
APPP05067 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APPP05067 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.4■□□□□ 0.54
APPP05067 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
APPP05067 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
APPP05067 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
APPP05067 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
APPP05067 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.39■□□□□ 0.53
APPP05067 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
APPP05067 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.39■□□□□ 0.53
APPP05067 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.39■□□□□ 0.53
APPP05067 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.39■□□□□ 0.53
APPP05067 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
APPP05067 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
APPP05067 MIR5189-201ENST00000577370 114 ntBASIC18.39■□□□□ 0.53
APPP05067 AC008735.3-201ENST00000596646 500 ntBASIC18.39■□□□□ 0.53
APPP05067 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.39■□□□□ 0.53
APPP05067 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.39■□□□□ 0.53
APPP05067 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APPP05067 MSTO2P-201ENST00000314835 1709 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms