Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.7■□□□□ 0.1
MT-ND3P03897 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MT-ND3P03897 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.7■□□□□ 0.1
MT-ND3P03897 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MT-ND3P03897 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.7■□□□□ 0.1
MT-ND3P03897 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.7■□□□□ 0.1
MT-ND3P03897 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MT-ND3P03897 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MT-ND3P03897 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
MT-ND3P03897 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.69■□□□□ 0.1
MT-ND3P03897 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
MT-ND3P03897 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.69■□□□□ 0.1
MT-ND3P03897 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MT-ND3P03897 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MT-ND3P03897 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
MT-ND3P03897 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MT-ND3P03897 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.69■□□□□ 0.1
MT-ND3P03897 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.69■□□□□ 0.1
MT-ND3P03897 FAM207CP-201ENST00000443486 507 ntBASIC15.69■□□□□ 0.1
MT-ND3P03897 TERF1P3-201ENST00000505638 1227 ntBASIC15.69■□□□□ 0.1
MT-ND3P03897 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.69■□□□□ 0.1
MT-ND3P03897 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.69■□□□□ 0.1
MT-ND3P03897 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.69■□□□□ 0.1
MT-ND3P03897 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.69■□□□□ 0.1
MT-ND3P03897 AC018529.1-201ENST00000613063 361 ntBASIC15.69■□□□□ 0.1
MT-ND3P03897 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
MT-ND3P03897 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
MT-ND3P03897 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MT-ND3P03897 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
MT-ND3P03897 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.69■□□□□ 0.1
MT-ND3P03897 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND3P03897 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MT-ND3P03897 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 CICP11-201ENST00000434745 2827 ntBASIC15.68■□□□□ 0.1
MT-ND3P03897 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.68■□□□□ 0.1
MT-ND3P03897 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
MT-ND3P03897 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MT-ND3P03897 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 HLA-H-201ENST00000383620 1096 ntBASIC15.68■□□□□ 0.1
MT-ND3P03897 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
MT-ND3P03897 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 TSPY16P-201ENST00000449843 468 ntBASIC15.68■□□□□ 0.1
MT-ND3P03897 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND3P03897 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.68■□□□□ 0.1
MT-ND3P03897 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.68■□□□□ 0.1
MT-ND3P03897 RARRES2P9-201ENST00000565168 469 ntBASIC15.68■□□□□ 0.1
MT-ND3P03897 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.68■□□□□ 0.1
MT-ND3P03897 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND3P03897 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms