Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC1P02654 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC1P02654 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC1P02654 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOC1P02654 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC1P02654 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
APOC1P02654 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOC1P02654 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.64□□□□□ -0.23
APOC1P02654 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC1P02654 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.64□□□□□ -0.23
APOC1P02654 HLA-J-203ENST00000494367 1087 ntBASIC13.64□□□□□ -0.23
APOC1P02654 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.64□□□□□ -0.23
APOC1P02654 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.64□□□□□ -0.23
APOC1P02654 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC1P02654 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
APOC1P02654 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.64□□□□□ -0.23
APOC1P02654 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 AC106881.1-201ENST00000605849 3329 ntBASIC13.64□□□□□ -0.23
APOC1P02654 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
APOC1P02654 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC1P02654 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC1P02654 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC1P02654 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
APOC1P02654 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC1P02654 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
APOC1P02654 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
APOC1P02654 AL080243.2-201ENST00000418783 582 ntBASIC13.63□□□□□ -0.23
APOC1P02654 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC1P02654 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.63□□□□□ -0.23
APOC1P02654 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC1P02654 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC1P02654 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC1P02654 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
APOC1P02654 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.63□□□□□ -0.23
APOC1P02654 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.63□□□□□ -0.23
APOC1P02654 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 AC134684.3-201ENST00000641758 218 ntBASIC13.63□□□□□ -0.23
APOC1P02654 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC1P02654 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC1P02654 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC1P02654 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC1P02654 MIR193BHG-211ENST00000641433 5365 ntBASIC13.63□□□□□ -0.23
APOC1P02654 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC1P02654 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
APOC1P02654 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms