Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 NUTM2HP-201ENST00000442076 2498 ntBASIC11.59□□□□□ -0.55
HLA-DQA1P01909 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.59□□□□□ -0.55
HLA-DQA1P01909 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 AC132008.2-207ENST00000454517 770 ntBASIC11.59□□□□□ -0.55
HLA-DQA1P01909 TPT1P11-201ENST00000458482 498 ntBASIC11.59□□□□□ -0.55
HLA-DQA1P01909 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 KRT18P31-201ENST00000506277 1292 ntBASIC11.59□□□□□ -0.55
HLA-DQA1P01909 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 AC243562.2-201ENST00000561247 970 ntBASIC11.59□□□□□ -0.55
HLA-DQA1P01909 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.55
HLA-DQA1P01909 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
HLA-DQA1P01909 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
HLA-DQA1P01909 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
HLA-DQA1P01909 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 AC018442.1-201ENST00000421439 2061 ntBASIC11.58□□□□□ -0.56
HLA-DQA1P01909 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.58□□□□□ -0.56
HLA-DQA1P01909 AP001269.4-201ENST00000609611 512 ntBASIC11.58□□□□□ -0.56
HLA-DQA1P01909 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
HLA-DQA1P01909 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms