Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 LINC02228-204ENST00000642115 2962 ntBASIC16.22■□□□□ 0.19
ZBED1O96006 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.22■□□□□ 0.19
ZBED1O96006 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.22■□□□□ 0.19
ZBED1O96006 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ZBED1O96006 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.22■□□□□ 0.19
ZBED1O96006 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZBED1O96006 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.21■□□□□ 0.19
ZBED1O96006 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.21■□□□□ 0.19
ZBED1O96006 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.21■□□□□ 0.19
ZBED1O96006 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.21■□□□□ 0.19
ZBED1O96006 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ZBED1O96006 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.21■□□□□ 0.19
ZBED1O96006 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.21■□□□□ 0.19
ZBED1O96006 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.21■□□□□ 0.19
ZBED1O96006 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 IGHV3-72-202ENST00000621503 303 ntBASIC16.21■□□□□ 0.19
ZBED1O96006 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.21■□□□□ 0.19
ZBED1O96006 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ZBED1O96006 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZBED1O96006 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.21■□□□□ 0.19
ZBED1O96006 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
ZBED1O96006 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
ZBED1O96006 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZBED1O96006 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
ZBED1O96006 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
ZBED1O96006 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.2■□□□□ 0.18
ZBED1O96006 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.2■□□□□ 0.18
ZBED1O96006 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.2■□□□□ 0.18
ZBED1O96006 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 AC007389.4-201ENST00000454674 793 ntBASIC16.2■□□□□ 0.18
ZBED1O96006 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.2■□□□□ 0.18
ZBED1O96006 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.2■□□□□ 0.18
ZBED1O96006 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.2■□□□□ 0.18
ZBED1O96006 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.2■□□□□ 0.18
ZBED1O96006 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 AC010319.3-201ENST00000597028 470 ntBASIC16.2■□□□□ 0.18
ZBED1O96006 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ZBED1O96006 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.2■□□□□ 0.18
ZBED1O96006 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZBED1O96006 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.2■□□□□ 0.18
ZBED1O96006 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.2■□□□□ 0.18
ZBED1O96006 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.2■□□□□ 0.18
ZBED1O96006 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.2■□□□□ 0.18
ZBED1O96006 TNRC18P2-201ENST00000417666 2714 ntBASIC16.2■□□□□ 0.18
ZBED1O96006 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
ZBED1O96006 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.2■□□□□ 0.18
ZBED1O96006 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZBED1O96006 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ZBED1O96006 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZBED1O96006 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.19■□□□□ 0.18
ZBED1O96006 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.19■□□□□ 0.18
ZBED1O96006 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZBED1O96006 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.19■□□□□ 0.18
ZBED1O96006 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms