Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC006001.1-201ENST00000325130 474 ntBASIC18.2■□□□□ 0.5
MBD4O95243 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
MBD4O95243 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.2■□□□□ 0.5
MBD4O95243 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.2■□□□□ 0.5
MBD4O95243 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MBD4O95243 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MBD4O95243 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.2■□□□□ 0.5
MBD4O95243 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MBD4O95243 AC026434.2-201ENST00000506094 1078 ntBASIC18.2■□□□□ 0.5
MBD4O95243 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.2■□□□□ 0.5
MBD4O95243 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MBD4O95243 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MBD4O95243 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.2■□□□□ 0.5
MBD4O95243 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.2■□□□□ 0.5
MBD4O95243 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
MBD4O95243 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.2■□□□□ 0.5
MBD4O95243 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
MBD4O95243 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
MBD4O95243 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.2■□□□□ 0.5
MBD4O95243 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
MBD4O95243 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MBD4O95243 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
MBD4O95243 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MBD4O95243 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MBD4O95243 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.2■□□□□ 0.5
MBD4O95243 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MBD4O95243 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
MBD4O95243 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.19■□□□□ 0.5
MBD4O95243 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.19■□□□□ 0.5
MBD4O95243 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MBD4O95243 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MBD4O95243 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.19■□□□□ 0.5
MBD4O95243 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.19■□□□□ 0.5
MBD4O95243 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.19■□□□□ 0.5
MBD4O95243 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.19■□□□□ 0.5
MBD4O95243 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.19■□□□□ 0.5
MBD4O95243 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.19■□□□□ 0.5
MBD4O95243 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.19■□□□□ 0.5
MBD4O95243 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.19■□□□□ 0.5
MBD4O95243 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MBD4O95243 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.18■□□□□ 0.5
MBD4O95243 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
MBD4O95243 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MBD4O95243 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MBD4O95243 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.18■□□□□ 0.5
MBD4O95243 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 TPM3P8-201ENST00000330554 643 ntBASIC18.18■□□□□ 0.5
MBD4O95243 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.18■□□□□ 0.5
MBD4O95243 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 AC245100.3-201ENST00000441281 285 ntBASIC18.18■□□□□ 0.5
MBD4O95243 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MBD4O95243 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.18■□□□□ 0.5
MBD4O95243 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.18■□□□□ 0.5
MBD4O95243 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MBD4O95243 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.18■□□□□ 0.5
MBD4O95243 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.18■□□□□ 0.5
MBD4O95243 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MBD4O95243 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MBD4O95243 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.18■□□□□ 0.5
MBD4O95243 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.18■□□□□ 0.5
MBD4O95243 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.17■□□□□ 0.5
MBD4O95243 LILRP1-201ENST00000444199 1370 ntBASIC18.17■□□□□ 0.5
MBD4O95243 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MBD4O95243 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
MBD4O95243 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MBD4O95243 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.17■□□□□ 0.5
MBD4O95243 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MBD4O95243 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms