Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 AC138951.2-201ENST00000623455 1161 ntBASIC15.22■□□□□ 0.03
PCDHGA12O60330 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 PPT1-215ENST00000641471 2368 ntBASIC15.22■□□□□ 0.03
PCDHGA12O60330 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 LINC02447-202ENST00000501888 2146 ntBASIC15.22■□□□□ 0.03
PCDHGA12O60330 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA12O60330 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA12O60330 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 AHCYP2-201ENST00000430630 1300 ntBASIC15.21■□□□□ 0.03
PCDHGA12O60330 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 AC092506.1-202ENST00000401022 528 ntBASIC15.21■□□□□ 0.03
PCDHGA12O60330 BTBD6P1-201ENST00000412176 1267 ntBASIC15.21■□□□□ 0.03
PCDHGA12O60330 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.21■□□□□ 0.03
PCDHGA12O60330 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 GAPDHP40-201ENST00000505218 1006 ntBASIC15.21■□□□□ 0.03
PCDHGA12O60330 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.21■□□□□ 0.03
PCDHGA12O60330 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 AC006058.4-201ENST00000624016 1670 ntBASIC15.21■□□□□ 0.03
PCDHGA12O60330 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA12O60330 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA12O60330 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA12O60330 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA12O60330 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PCDHGA12O60330 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA12O60330 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDHGA12O60330 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 CD8B2-202ENST00000417670 633 ntBASIC15.2■□□□□ 0.02
PCDHGA12O60330 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 FAM197Y7-201ENST00000432892 766 ntBASIC15.2■□□□□ 0.02
PCDHGA12O60330 AC104306.2-201ENST00000451877 341 ntBASIC15.2■□□□□ 0.02
PCDHGA12O60330 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA12O60330 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA12O60330 AC078819.1-201ENST00000547454 765 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms