Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC093813.1-201ENST00000605066 256 ntBASIC18.88■□□□□ 0.61
SMARCA5O60264 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.88■□□□□ 0.61
SMARCA5O60264 RPSAP52-203ENST00000622976 1023 ntBASIC18.88■□□□□ 0.61
SMARCA5O60264 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.88■□□□□ 0.61
SMARCA5O60264 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SMARCA5O60264 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.88■□□□□ 0.61
SMARCA5O60264 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.88■□□□□ 0.61
SMARCA5O60264 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.88■□□□□ 0.61
SMARCA5O60264 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
SMARCA5O60264 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SMARCA5O60264 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SMARCA5O60264 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 MSTO2P-201ENST00000314835 1709 ntBASIC18.87■□□□□ 0.61
SMARCA5O60264 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 RNU1-114P-201ENST00000365297 166 ntBASIC18.87■□□□□ 0.61
SMARCA5O60264 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCA5O60264 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.87■□□□□ 0.61
SMARCA5O60264 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SMARCA5O60264 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.87■□□□□ 0.61
SMARCA5O60264 LILRP1-201ENST00000444199 1370 ntBASIC18.87■□□□□ 0.61
SMARCA5O60264 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.87■□□□□ 0.61
SMARCA5O60264 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCA5O60264 RPL13AP25-201ENST00000484130 612 ntBASIC18.87■□□□□ 0.61
SMARCA5O60264 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCA5O60264 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SMARCA5O60264 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SMARCA5O60264 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.87■□□□□ 0.61
SMARCA5O60264 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCA5O60264 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SMARCA5O60264 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.87■□□□□ 0.61
SMARCA5O60264 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SMARCA5O60264 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.87■□□□□ 0.61
SMARCA5O60264 CLUHP6-201ENST00000580789 941 ntBASIC18.87■□□□□ 0.61
SMARCA5O60264 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 AC133539.2-201ENST00000604757 467 ntBASIC18.87■□□□□ 0.61
SMARCA5O60264 CICP14-201ENST00000629111 2732 ntBASIC18.87■□□□□ 0.61
SMARCA5O60264 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.87■□□□□ 0.61
SMARCA5O60264 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.87■□□□□ 0.61
SMARCA5O60264 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SMARCA5O60264 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCA5O60264 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCA5O60264 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SMARCA5O60264 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCA5O60264 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCA5O60264 AC013726.1-201ENST00000563747 2285 ntBASIC18.86■□□□□ 0.61
SMARCA5O60264 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 AL137783.1-201ENST00000623494 1896 ntBASIC18.86■□□□□ 0.61
SMARCA5O60264 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMARCA5O60264 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMARCA5O60264 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SMARCA5O60264 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCA5O60264 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCA5O60264 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCA5O60264 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMARCA5O60264 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCA5O60264 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCA5O60264 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCA5O60264 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SMARCA5O60264 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMARCA5O60264 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCA5O60264 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMARCA5O60264 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCA5O60264 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms