Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SSSCA1O60232 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.56□□□□□ -0.4
SSSCA1O60232 BCAR1-209ENST00000546196 1340 ntBASIC12.56□□□□□ -0.4
SSSCA1O60232 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSSCA1O60232 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.56□□□□□ -0.4
SSSCA1O60232 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SSSCA1O60232 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.55□□□□□ -0.4
SSSCA1O60232 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.55□□□□□ -0.4
SSSCA1O60232 UPK3BP1-201ENST00000428678 509 ntBASIC12.55□□□□□ -0.4
SSSCA1O60232 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 AC098831.1-202ENST00000438821 336 ntBASIC12.55□□□□□ -0.4
SSSCA1O60232 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.55□□□□□ -0.4
SSSCA1O60232 AC009947.1-201ENST00000444350 727 ntBASIC12.55□□□□□ -0.4
SSSCA1O60232 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.55□□□□□ -0.4
SSSCA1O60232 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.55□□□□□ -0.4
SSSCA1O60232 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.55□□□□□ -0.4
SSSCA1O60232 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
SSSCA1O60232 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.55□□□□□ -0.4
SSSCA1O60232 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.55□□□□□ -0.4
SSSCA1O60232 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.55□□□□□ -0.4
SSSCA1O60232 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SSSCA1O60232 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSSCA1O60232 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms