Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 FUCA1P1-201ENST00000374476 1351 ntBASIC18.67■□□□□ 0.58
RGPD3A6NKT7 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 SNORA57-201ENST00000383870 149 ntBASIC18.67■□□□□ 0.58
RGPD3A6NKT7 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 HNRNPA1P42-201ENST00000458678 957 ntBASIC18.67■□□□□ 0.58
RGPD3A6NKT7 AC006529.1-201ENST00000459978 637 ntBASIC18.67■□□□□ 0.58
RGPD3A6NKT7 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 ALG1L7P-201ENST00000502317 768 ntBASIC18.67■□□□□ 0.58
RGPD3A6NKT7 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 KNOP1P1-201ENST00000542108 989 ntBASIC18.67■□□□□ 0.58
RGPD3A6NKT7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 SALL4P5-201ENST00000419001 1760 ntBASIC18.67■□□□□ 0.58
RGPD3A6NKT7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.67■□□□□ 0.58
RGPD3A6NKT7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 RNVU1-8-201ENST00000364272 125 ntBASIC18.66■□□□□ 0.58
RGPD3A6NKT7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 OR8T1P-201ENST00000421347 918 ntBASIC18.66■□□□□ 0.58
RGPD3A6NKT7 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 RPS18P9-201ENST00000482817 460 ntBASIC18.66■□□□□ 0.58
RGPD3A6NKT7 KRT8P2-201ENST00000556193 944 ntBASIC18.66■□□□□ 0.58
RGPD3A6NKT7 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 LINC00244-201ENST00000625073 613 ntBASIC18.66■□□□□ 0.58
RGPD3A6NKT7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 AC006372.4-201ENST00000624122 1543 ntBASIC18.66■□□□□ 0.58
RGPD3A6NKT7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.66■□□□□ 0.58
RGPD3A6NKT7 AC009090.5-201ENST00000624886 2285 ntBASIC18.66■□□□□ 0.58
RGPD3A6NKT7 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 AL512599.1-201ENST00000430724 685 ntBASIC18.65■□□□□ 0.58
RGPD3A6NKT7 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 HIST1H2APS2-201ENST00000454426 370 ntBASIC18.65■□□□□ 0.58
RGPD3A6NKT7 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 RNA5SP406-201ENST00000516106 112 ntBASIC18.65■□□□□ 0.58
RGPD3A6NKT7 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 AC112504.1-201ENST00000623415 1841 ntBASIC18.65■□□□□ 0.58
RGPD3A6NKT7 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms