Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MIR6069-201ENST00000620069 79 ntBASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 AL645728.2-202ENST00000641679 227 ntBASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 Z97205.2-201ENST00000564697 1639 ntBASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 MYO15B-237ENST00000642007 4893 ntBASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV6-7A0A0A0MS04 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 MST1P2-201ENST00000457982 2291 ntBASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 INTS4P1-203ENST00000641008 3683 ntBASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 AL133267.1-201ENST00000398220 340 ntBASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 AP000344.2-201ENST00000512987 629 ntBASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC009093.7-201ENST00000623853 1223 ntBASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC089987.1-201ENST00000551654 2209 ntBASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC027612.1-201ENST00000445234 2395 ntBASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV6-7A0A0A0MS04 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 AL161772.1-201ENST00000610494 4412 ntBASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 AL022342.1-201ENST00000400363 863 ntBASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV6-7A0A0A0MS04 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms