Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 MIR6724-1-201ENST00000616420 92 ntBASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 MIR6724-2-201ENST00000616483 92 ntBASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 MIR6724-4-201ENST00000617390 92 ntBASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 MIR6724-3-201ENST00000622482 92 ntBASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGA6Q9Y5G7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA6Q9Y5G7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGA6Q9Y5G7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA6Q9Y5G7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHGA6Q9Y5G7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA6Q9Y5G7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA6Q9Y5G7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA6Q9Y5G7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
PCDHGA6Q9Y5G7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHGA6Q9Y5G7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA6Q9Y5G7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 AC131281.2-201ENST00000520478 145 ntBASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 MTDHP2-201ENST00000601468 714 ntBASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 AL117332.1-201ENST00000622628 974 ntBASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PCDHGA6Q9Y5G7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 MIR3621-201ENST00000580529 85 ntBASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGA6Q9Y5G7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGA6Q9Y5G7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGA6Q9Y5G7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGA6Q9Y5G7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDHGA6Q9Y5G7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDHGA6Q9Y5G7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHGA6Q9Y5G7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHGA6Q9Y5G7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGA6Q9Y5G7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGA6Q9Y5G7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGA6Q9Y5G7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGA6Q9Y5G7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHGA6Q9Y5G7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGA6Q9Y5G7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA6Q9Y5G7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHGA6Q9Y5G7 MIR638-201ENST00000385237 100 ntBASIC22.11■■□□□ 1.13
PCDHGA6Q9Y5G7 AL139246.5-201ENST00000606645 996 ntBASIC22.11■■□□□ 1.13
PCDHGA6Q9Y5G7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA6Q9Y5G7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.1■■□□□ 1.13
PCDHGA6Q9Y5G7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA6Q9Y5G7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PCDHGA6Q9Y5G7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA6Q9Y5G7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA6Q9Y5G7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms