Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 AC099791.1-201ENST00000416440 715 ntBASIC26.65■■□□□ 1.86
PTPN22Q9Y2R2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC26.65■■□□□ 1.86
PTPN22Q9Y2R2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.65■■□□□ 1.86
PTPN22Q9Y2R2 AC092437.1-201ENST00000624794 1048 ntBASIC26.65■■□□□ 1.86
PTPN22Q9Y2R2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.65■■□□□ 1.86
PTPN22Q9Y2R2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PTPN22Q9Y2R2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PTPN22Q9Y2R2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PTPN22Q9Y2R2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.64■■□□□ 1.86
PTPN22Q9Y2R2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PTPN22Q9Y2R2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PTPN22Q9Y2R2 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.64■■□□□ 1.86
PTPN22Q9Y2R2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PTPN22Q9Y2R2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PTPN22Q9Y2R2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.64■■□□□ 1.86
PTPN22Q9Y2R2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.64■■□□□ 1.86
PTPN22Q9Y2R2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.64■■□□□ 1.86
PTPN22Q9Y2R2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.64■■□□□ 1.86
PTPN22Q9Y2R2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PTPN22Q9Y2R2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PTPN22Q9Y2R2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PTPN22Q9Y2R2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.85
PTPN22Q9Y2R2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
PTPN22Q9Y2R2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.63■■□□□ 1.85
PTPN22Q9Y2R2 KRT18P5-201ENST00000436075 1291 ntBASIC26.63■■□□□ 1.85
PTPN22Q9Y2R2 SLC47A1P1-202ENST00000449666 945 ntBASIC26.63■■□□□ 1.85
PTPN22Q9Y2R2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PTPN22Q9Y2R2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PTPN22Q9Y2R2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.62■■□□□ 1.85
PTPN22Q9Y2R2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
PTPN22Q9Y2R2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.62■■□□□ 1.85
PTPN22Q9Y2R2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTPN22Q9Y2R2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.61■■□□□ 1.85
PTPN22Q9Y2R2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTPN22Q9Y2R2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PTPN22Q9Y2R2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTPN22Q9Y2R2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTPN22Q9Y2R2 FOXO3B-201ENST00000395675 1928 ntBASIC26.61■■□□□ 1.85
PTPN22Q9Y2R2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 AC011298.3-201ENST00000615796 283 ntBASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PTPN22Q9Y2R2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
PTPN22Q9Y2R2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PTPN22Q9Y2R2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.59■■□□□ 1.85
PTPN22Q9Y2R2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.58■■□□□ 1.85
PTPN22Q9Y2R2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.58■■□□□ 1.85
PTPN22Q9Y2R2 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.58■■□□□ 1.85
PTPN22Q9Y2R2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.58■■□□□ 1.85
PTPN22Q9Y2R2 AC090877.2-201ENST00000558441 1738 ntBASIC26.58■■□□□ 1.85
PTPN22Q9Y2R2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
PTPN22Q9Y2R2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.84
PTPN22Q9Y2R2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PTPN22Q9Y2R2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.57■■□□□ 1.84
PTPN22Q9Y2R2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.57■■□□□ 1.84
PTPN22Q9Y2R2 AL138724.1-201ENST00000606771 1088 ntBASIC26.57■■□□□ 1.84
PTPN22Q9Y2R2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PTPN22Q9Y2R2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
PTPN22Q9Y2R2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN22Q9Y2R2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 AC005703.6-201ENST00000623265 1329 ntBASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTPN22Q9Y2R2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
PTPN22Q9Y2R2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PTPN22Q9Y2R2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
PTPN22Q9Y2R2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PTPN22Q9Y2R2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTPN22Q9Y2R2 AC004911.1-201ENST00000416316 871 ntBASIC26.54■■□□□ 1.84
PTPN22Q9Y2R2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.54■■□□□ 1.84
PTPN22Q9Y2R2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
PTPN22Q9Y2R2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms