Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MRPS28Q9Y2Q9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.81■□□□□ 0.76
MRPS28Q9Y2Q9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
MRPS28Q9Y2Q9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MRPS28Q9Y2Q9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.81■□□□□ 0.76
MRPS28Q9Y2Q9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.81■□□□□ 0.76
MRPS28Q9Y2Q9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.81■□□□□ 0.76
MRPS28Q9Y2Q9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MRPS28Q9Y2Q9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
MRPS28Q9Y2Q9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPS28Q9Y2Q9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPS28Q9Y2Q9 AC009831.1-201ENST00000580420 1582 ntBASIC19.8■□□□□ 0.76
MRPS28Q9Y2Q9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.8■□□□□ 0.76
MRPS28Q9Y2Q9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MRPS28Q9Y2Q9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPS28Q9Y2Q9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.79■□□□□ 0.76
MRPS28Q9Y2Q9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MRPS28Q9Y2Q9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPS28Q9Y2Q9 AC133552.2-201ENST00000619106 1032 ntBASIC19.79■□□□□ 0.76
MRPS28Q9Y2Q9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPS28Q9Y2Q9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MRPS28Q9Y2Q9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPS28Q9Y2Q9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPS28Q9Y2Q9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPS28Q9Y2Q9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPS28Q9Y2Q9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
MRPS28Q9Y2Q9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPS28Q9Y2Q9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRPS28Q9Y2Q9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPS28Q9Y2Q9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRPS28Q9Y2Q9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRPS28Q9Y2Q9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
MRPS28Q9Y2Q9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MRPS28Q9Y2Q9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRPS28Q9Y2Q9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRPS28Q9Y2Q9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
MRPS28Q9Y2Q9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.77■□□□□ 0.76
MRPS28Q9Y2Q9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MRPS28Q9Y2Q9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
MRPS28Q9Y2Q9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MRPS28Q9Y2Q9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 MIR4449-201ENST00000578365 66 ntBASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.76■□□□□ 0.75
MRPS28Q9Y2Q9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 C9orf163-202ENST00000624034 2573 ntBASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPS28Q9Y2Q9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 RPS2P7-201ENST00000447334 885 ntBASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MRPS28Q9Y2Q9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms