Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.08■□□□□ 0.97
RPH3AQ9Y2J0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.08■□□□□ 0.97
RPH3AQ9Y2J0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPH3AQ9Y2J0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.08■□□□□ 0.97
RPH3AQ9Y2J0 AF131216.4-201ENST00000638924 1588 ntBASIC21.08■□□□□ 0.97
RPH3AQ9Y2J0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.08■□□□□ 0.96
RPH3AQ9Y2J0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.08■□□□□ 0.96
RPH3AQ9Y2J0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPH3AQ9Y2J0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPH3AQ9Y2J0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RPH3AQ9Y2J0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPH3AQ9Y2J0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPH3AQ9Y2J0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.07■□□□□ 0.96
RPH3AQ9Y2J0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
RPH3AQ9Y2J0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.07■□□□□ 0.96
RPH3AQ9Y2J0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPH3AQ9Y2J0 AC021242.3-201ENST00000607598 1377 ntBASIC21.07■□□□□ 0.96
RPH3AQ9Y2J0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPH3AQ9Y2J0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.06■□□□□ 0.96
RPH3AQ9Y2J0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPH3AQ9Y2J0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPH3AQ9Y2J0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPH3AQ9Y2J0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPH3AQ9Y2J0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPH3AQ9Y2J0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.05■□□□□ 0.96
RPH3AQ9Y2J0 TSPY9P-201ENST00000440215 945 ntBASIC21.05■□□□□ 0.96
RPH3AQ9Y2J0 TSPY11P-201ENST00000442607 1045 ntBASIC21.05■□□□□ 0.96
RPH3AQ9Y2J0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.05■□□□□ 0.96
RPH3AQ9Y2J0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPH3AQ9Y2J0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.04■□□□□ 0.96
RPH3AQ9Y2J0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RPH3AQ9Y2J0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPH3AQ9Y2J0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPH3AQ9Y2J0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RPH3AQ9Y2J0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPH3AQ9Y2J0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.03■□□□□ 0.96
RPH3AQ9Y2J0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.03■□□□□ 0.96
RPH3AQ9Y2J0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.03■□□□□ 0.96
RPH3AQ9Y2J0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPH3AQ9Y2J0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RPH3AQ9Y2J0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPH3AQ9Y2J0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPH3AQ9Y2J0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.02■□□□□ 0.96
RPH3AQ9Y2J0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.02■□□□□ 0.96
RPH3AQ9Y2J0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPH3AQ9Y2J0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPH3AQ9Y2J0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
RPH3AQ9Y2J0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.02■□□□□ 0.95
RPH3AQ9Y2J0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RPH3AQ9Y2J0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPH3AQ9Y2J0 HLA-L-211ENST00000482052 1765 ntBASIC21■□□□□ 0.95
RPH3AQ9Y2J0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPH3AQ9Y2J0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPH3AQ9Y2J0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPH3AQ9Y2J0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RPH3AQ9Y2J0 AL356441.2-201ENST00000443009 864 ntBASIC21■□□□□ 0.95
RPH3AQ9Y2J0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPH3AQ9Y2J0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21■□□□□ 0.95
RPH3AQ9Y2J0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21■□□□□ 0.95
RPH3AQ9Y2J0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPH3AQ9Y2J0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPH3AQ9Y2J0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPH3AQ9Y2J0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPH3AQ9Y2J0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPH3AQ9Y2J0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RPH3AQ9Y2J0 AC092028.1-203ENST00000608262 953 ntBASIC20.99■□□□□ 0.95
RPH3AQ9Y2J0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPH3AQ9Y2J0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPH3AQ9Y2J0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPH3AQ9Y2J0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.99■□□□□ 0.95
RPH3AQ9Y2J0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPH3AQ9Y2J0 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.98■□□□□ 0.95
RPH3AQ9Y2J0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPH3AQ9Y2J0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
RPH3AQ9Y2J0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
RPH3AQ9Y2J0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.98■□□□□ 0.95
RPH3AQ9Y2J0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.98■□□□□ 0.95
RPH3AQ9Y2J0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPH3AQ9Y2J0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.98■□□□□ 0.95
RPH3AQ9Y2J0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms