Protein–RNA interactions for Protein: Q9NZ42

PSENEN, Gamma-secretase subunit PEN-2, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSENENQ9NZ42 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSENENQ9NZ42 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.64■□□□□ 0.58
PSENENQ9NZ42 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
PSENENQ9NZ42 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.64■□□□□ 0.58
PSENENQ9NZ42 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSENENQ9NZ42 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PSENENQ9NZ42 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PSENENQ9NZ42 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSENENQ9NZ42 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.64■□□□□ 0.57
PSENENQ9NZ42 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PSENENQ9NZ42 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSENENQ9NZ42 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSENENQ9NZ42 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.64■□□□□ 0.57
PSENENQ9NZ42 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSENENQ9NZ42 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 AC025884.2-201ENST00000553429 711 ntBASIC18.62■□□□□ 0.57
PSENENQ9NZ42 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PSENENQ9NZ42 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSENENQ9NZ42 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.61■□□□□ 0.57
PSENENQ9NZ42 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.61■□□□□ 0.57
PSENENQ9NZ42 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSENENQ9NZ42 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSENENQ9NZ42 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PSENENQ9NZ42 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSENENQ9NZ42 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PSENENQ9NZ42 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSENENQ9NZ42 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSENENQ9NZ42 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSENENQ9NZ42 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSENENQ9NZ42 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSENENQ9NZ42 AC233723.2-201ENST00000623798 2106 ntBASIC18.59■□□□□ 0.57
PSENENQ9NZ42 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSENENQ9NZ42 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSENENQ9NZ42 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.59■□□□□ 0.57
PSENENQ9NZ42 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PSENENQ9NZ42 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSENENQ9NZ42 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.59■□□□□ 0.57
PSENENQ9NZ42 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSENENQ9NZ42 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSENENQ9NZ42 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PSENENQ9NZ42 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PSENENQ9NZ42 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSENENQ9NZ42 ZNRF2P2-203ENST00000454624 420 ntBASIC18.58■□□□□ 0.56
PSENENQ9NZ42 AL157400.5-201ENST00000507624 621 ntBASIC18.58■□□□□ 0.56
PSENENQ9NZ42 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSENENQ9NZ42 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSENENQ9NZ42 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSENENQ9NZ42 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 CR559946.2-201ENST00000623684 991 ntBASIC18.57■□□□□ 0.56
PSENENQ9NZ42 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 SMPD5-203ENST00000639008 1464 ntBASIC18.57■□□□□ 0.56
PSENENQ9NZ42 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PSENENQ9NZ42 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSENENQ9NZ42 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSENENQ9NZ42 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PSENENQ9NZ42 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSENENQ9NZ42 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSENENQ9NZ42 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PSENENQ9NZ42 FOXO3B-201ENST00000395675 1928 ntBASIC18.56■□□□□ 0.56
PSENENQ9NZ42 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSENENQ9NZ42 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PSENENQ9NZ42 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms