Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LIN7CQ9NUP9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LIN7CQ9NUP9 SPCS2P3-201ENST00000500401 656 ntBASIC19.09■□□□□ 0.65
LIN7CQ9NUP9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN7CQ9NUP9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.09■□□□□ 0.65
LIN7CQ9NUP9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN7CQ9NUP9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LIN7CQ9NUP9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LIN7CQ9NUP9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LIN7CQ9NUP9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.08■□□□□ 0.65
LIN7CQ9NUP9 TSPY13P-201ENST00000338964 914 ntBASIC19.08■□□□□ 0.64
LIN7CQ9NUP9 ATP5G2P3-201ENST00000429083 425 ntBASIC19.08■□□□□ 0.64
LIN7CQ9NUP9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.08■□□□□ 0.64
LIN7CQ9NUP9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LIN7CQ9NUP9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LIN7CQ9NUP9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIN7CQ9NUP9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIN7CQ9NUP9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIN7CQ9NUP9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIN7CQ9NUP9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 AC004987.1-201ENST00000428627 508 ntBASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.07■□□□□ 0.64
LIN7CQ9NUP9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LIN7CQ9NUP9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LIN7CQ9NUP9 FOXO3B-201ENST00000395675 1928 ntBASIC19.06■□□□□ 0.64
LIN7CQ9NUP9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIN7CQ9NUP9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.06■□□□□ 0.64
LIN7CQ9NUP9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.06■□□□□ 0.64
LIN7CQ9NUP9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.06■□□□□ 0.64
LIN7CQ9NUP9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LIN7CQ9NUP9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LIN7CQ9NUP9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
LIN7CQ9NUP9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LIN7CQ9NUP9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.03■□□□□ 0.64
LIN7CQ9NUP9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 DUX4L18-201ENST00000553347 1267 ntBASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIN7CQ9NUP9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.02■□□□□ 0.63
LIN7CQ9NUP9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LIN7CQ9NUP9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIN7CQ9NUP9 AL033527.3-201ENST00000566366 1196 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms