Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC148477.6-201ENST00000623746 465 ntBASIC20.86■□□□□ 0.93
HMG20AQ9NP66 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20AQ9NP66 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HMG20AQ9NP66 MIR219A2-201ENST00000608502 1504 ntBASIC20.84■□□□□ 0.93
HMG20AQ9NP66 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.84■□□□□ 0.93
HMG20AQ9NP66 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20AQ9NP66 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HMG20AQ9NP66 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20AQ9NP66 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20AQ9NP66 AC007375.3-201ENST00000600936 2314 ntBASIC20.84■□□□□ 0.93
HMG20AQ9NP66 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HMG20AQ9NP66 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20AQ9NP66 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20AQ9NP66 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20AQ9NP66 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMG20AQ9NP66 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMG20AQ9NP66 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMG20AQ9NP66 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMG20AQ9NP66 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.83■□□□□ 0.93
HMG20AQ9NP66 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.83■□□□□ 0.93
HMG20AQ9NP66 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.83■□□□□ 0.93
HMG20AQ9NP66 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.83■□□□□ 0.93
HMG20AQ9NP66 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.83■□□□□ 0.93
HMG20AQ9NP66 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
HMG20AQ9NP66 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20AQ9NP66 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMG20AQ9NP66 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.82■□□□□ 0.92
HMG20AQ9NP66 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HMG20AQ9NP66 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMG20AQ9NP66 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20AQ9NP66 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.8■□□□□ 0.92
HMG20AQ9NP66 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HMG20AQ9NP66 HLA-V-202ENST00000446817 847 ntBASIC20.8■□□□□ 0.92
HMG20AQ9NP66 CR559946.2-201ENST00000623684 991 ntBASIC20.8■□□□□ 0.92
HMG20AQ9NP66 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20AQ9NP66 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20AQ9NP66 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20AQ9NP66 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HMG20AQ9NP66 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20AQ9NP66 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20AQ9NP66 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20AQ9NP66 SLC6A10P-202ENST00000431994 2058 ntBASIC20.79■□□□□ 0.92
HMG20AQ9NP66 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.79■□□□□ 0.92
HMG20AQ9NP66 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20AQ9NP66 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.79■□□□□ 0.92
HMG20AQ9NP66 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20AQ9NP66 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20AQ9NP66 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20AQ9NP66 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HMG20AQ9NP66 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20AQ9NP66 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20AQ9NP66 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20AQ9NP66 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20AQ9NP66 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HMG20AQ9NP66 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HMG20AQ9NP66 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.78■□□□□ 0.92
HMG20AQ9NP66 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20AQ9NP66 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.78■□□□□ 0.92
HMG20AQ9NP66 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
HMG20AQ9NP66 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HMG20AQ9NP66 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms