Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 TSPY13P-201ENST00000338964 914 ntBASIC23.19■■□□□ 1.3
MRM3Q9HC36 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.19■■□□□ 1.3
MRM3Q9HC36 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
MRM3Q9HC36 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MRM3Q9HC36 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MRM3Q9HC36 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.18■■□□□ 1.3
MRM3Q9HC36 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.18■■□□□ 1.3
MRM3Q9HC36 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MRM3Q9HC36 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
MRM3Q9HC36 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.18■■□□□ 1.3
MRM3Q9HC36 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MRM3Q9HC36 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MRM3Q9HC36 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
MRM3Q9HC36 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.17■■□□□ 1.3
MRM3Q9HC36 BHLHE23-202ENST00000612929 1109 ntBASIC23.17■■□□□ 1.3
MRM3Q9HC36 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
MRM3Q9HC36 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MRM3Q9HC36 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MRM3Q9HC36 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.16■■□□□ 1.3
MRM3Q9HC36 AL033527.3-201ENST00000566366 1196 ntBASIC23.16■■□□□ 1.3
MRM3Q9HC36 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.15■■□□□ 1.3
MRM3Q9HC36 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
MRM3Q9HC36 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MRM3Q9HC36 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MRM3Q9HC36 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
MRM3Q9HC36 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MRM3Q9HC36 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.15■■□□□ 1.3
MRM3Q9HC36 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MRM3Q9HC36 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MRM3Q9HC36 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.14■■□□□ 1.3
MRM3Q9HC36 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
MRM3Q9HC36 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRM3Q9HC36 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRM3Q9HC36 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
MRM3Q9HC36 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.14■■□□□ 1.29
MRM3Q9HC36 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.14■■□□□ 1.29
MRM3Q9HC36 PVT1_1.1-201ENST00000615125 194 ntBASIC23.14■■□□□ 1.29
MRM3Q9HC36 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.14■■□□□ 1.29
MRM3Q9HC36 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
MRM3Q9HC36 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.13■■□□□ 1.29
MRM3Q9HC36 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MRM3Q9HC36 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MRM3Q9HC36 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
MRM3Q9HC36 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.13■■□□□ 1.29
MRM3Q9HC36 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.13■■□□□ 1.29
MRM3Q9HC36 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
MRM3Q9HC36 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MRM3Q9HC36 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MRM3Q9HC36 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MRM3Q9HC36 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
MRM3Q9HC36 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.12■■□□□ 1.29
MRM3Q9HC36 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MRM3Q9HC36 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
MRM3Q9HC36 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.12■■□□□ 1.29
MRM3Q9HC36 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.12■■□□□ 1.29
MRM3Q9HC36 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MRM3Q9HC36 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.12■■□□□ 1.29
MRM3Q9HC36 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.12■■□□□ 1.29
MRM3Q9HC36 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MRM3Q9HC36 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MRM3Q9HC36 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.11■■□□□ 1.29
MRM3Q9HC36 AL022069.1-201ENST00000568025 1636 ntBASIC23.11■■□□□ 1.29
MRM3Q9HC36 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MRM3Q9HC36 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.11■■□□□ 1.29
MRM3Q9HC36 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
MRM3Q9HC36 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.11■■□□□ 1.29
MRM3Q9HC36 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.11■■□□□ 1.29
MRM3Q9HC36 AC120024.1-201ENST00000562672 995 ntBASIC23.11■■□□□ 1.29
MRM3Q9HC36 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.11■■□□□ 1.29
MRM3Q9HC36 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.11■■□□□ 1.29
MRM3Q9HC36 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
MRM3Q9HC36 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MRM3Q9HC36 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
MRM3Q9HC36 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MRM3Q9HC36 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.1■■□□□ 1.29
MRM3Q9HC36 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
MRM3Q9HC36 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MRM3Q9HC36 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MRM3Q9HC36 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MRM3Q9HC36 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MRM3Q9HC36 KRT18P24-201ENST00000344739 1156 ntBASIC23.1■■□□□ 1.29
MRM3Q9HC36 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.1■■□□□ 1.29
MRM3Q9HC36 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
MRM3Q9HC36 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MRM3Q9HC36 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
MRM3Q9HC36 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MRM3Q9HC36 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MRM3Q9HC36 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
MRM3Q9HC36 AC010980.1-201ENST00000587192 1142 ntBASIC23.09■■□□□ 1.29
MRM3Q9HC36 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.09■■□□□ 1.29
MRM3Q9HC36 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.09■■□□□ 1.29
MRM3Q9HC36 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MRM3Q9HC36 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
MRM3Q9HC36 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
MRM3Q9HC36 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MRM3Q9HC36 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.08■■□□□ 1.29
MRM3Q9HC36 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MRM3Q9HC36 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.28
MRM3Q9HC36 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
MRM3Q9HC36 AC131274.2-201ENST00000580697 1507 ntBASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms