Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.13■■■□□ 2.25
CHMP4BQ9H444 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHMP4BQ9H444 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHMP4BQ9H444 AL022069.1-201ENST00000568025 1636 ntBASIC29.13■■■□□ 2.25
CHMP4BQ9H444 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC29.13■■■□□ 2.25
CHMP4BQ9H444 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHMP4BQ9H444 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHMP4BQ9H444 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHMP4BQ9H444 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHMP4BQ9H444 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.12■■■□□ 2.25
CHMP4BQ9H444 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC29.11■■■□□ 2.25
CHMP4BQ9H444 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHMP4BQ9H444 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHMP4BQ9H444 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.11■■■□□ 2.25
CHMP4BQ9H444 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC29.11■■■□□ 2.25
CHMP4BQ9H444 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHMP4BQ9H444 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.1■■■□□ 2.25
CHMP4BQ9H444 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC29.1■■■□□ 2.25
CHMP4BQ9H444 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHMP4BQ9H444 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CHMP4BQ9H444 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC29.09■■■□□ 2.25
CHMP4BQ9H444 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.09■■■□□ 2.25
CHMP4BQ9H444 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC29.09■■■□□ 2.25
CHMP4BQ9H444 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CHMP4BQ9H444 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHMP4BQ9H444 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
CHMP4BQ9H444 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CHMP4BQ9H444 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHMP4BQ9H444 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHMP4BQ9H444 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHMP4BQ9H444 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHMP4BQ9H444 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.08■■■□□ 2.25
CHMP4BQ9H444 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
CHMP4BQ9H444 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHMP4BQ9H444 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 YBX1P4-201ENST00000392794 808 ntBASIC29.06■■■□□ 2.24
CHMP4BQ9H444 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
CHMP4BQ9H444 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
CHMP4BQ9H444 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CHMP4BQ9H444 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.04■■■□□ 2.24
CHMP4BQ9H444 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC29.04■■■□□ 2.24
CHMP4BQ9H444 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.04■■■□□ 2.24
CHMP4BQ9H444 MIR4281-201ENST00000580852 62 ntBASIC29.04■■■□□ 2.24
CHMP4BQ9H444 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHMP4BQ9H444 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CHMP4BQ9H444 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHMP4BQ9H444 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHMP4BQ9H444 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHMP4BQ9H444 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHMP4BQ9H444 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHMP4BQ9H444 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHMP4BQ9H444 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHMP4BQ9H444 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CHMP4BQ9H444 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC29.03■■■□□ 2.24
CHMP4BQ9H444 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CHMP4BQ9H444 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHMP4BQ9H444 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHMP4BQ9H444 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHMP4BQ9H444 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC29.02■■■□□ 2.24
CHMP4BQ9H444 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC29.01■■■□□ 2.24
CHMP4BQ9H444 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
CHMP4BQ9H444 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHMP4BQ9H444 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHMP4BQ9H444 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CHMP4BQ9H444 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHMP4BQ9H444 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29■■■□□ 2.23
CHMP4BQ9H444 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
CHMP4BQ9H444 AC103834.1-201ENST00000520383 144 ntBASIC29■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms