Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MED28Q9H204 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MED28Q9H204 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.67■□□□□ 0.74
MED28Q9H204 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MED28Q9H204 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MED28Q9H204 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
MED28Q9H204 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.67■□□□□ 0.74
MED28Q9H204 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MED28Q9H204 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MED28Q9H204 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MED28Q9H204 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MED28Q9H204 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MED28Q9H204 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
MED28Q9H204 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MED28Q9H204 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
MED28Q9H204 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MED28Q9H204 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.67■□□□□ 0.74
MED28Q9H204 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.66■□□□□ 0.74
MED28Q9H204 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.66■□□□□ 0.74
MED28Q9H204 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MED28Q9H204 AL137060.1-201ENST00000618151 2648 ntBASIC19.66■□□□□ 0.74
MED28Q9H204 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
MED28Q9H204 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MED28Q9H204 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.66■□□□□ 0.74
MED28Q9H204 AP002365.1-201ENST00000603448 772 ntBASIC19.66■□□□□ 0.74
MED28Q9H204 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MED28Q9H204 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MED28Q9H204 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.66■□□□□ 0.74
MED28Q9H204 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MED28Q9H204 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.66■□□□□ 0.74
MED28Q9H204 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MED28Q9H204 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.66■□□□□ 0.74
MED28Q9H204 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MED28Q9H204 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.65■□□□□ 0.74
MED28Q9H204 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.65■□□□□ 0.74
MED28Q9H204 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.65■□□□□ 0.74
MED28Q9H204 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MED28Q9H204 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MED28Q9H204 AC110285.7-201ENST00000624417 1536 ntBASIC19.65■□□□□ 0.74
MED28Q9H204 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MED28Q9H204 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MED28Q9H204 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
MED28Q9H204 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MED28Q9H204 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
MED28Q9H204 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MED28Q9H204 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MED28Q9H204 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
MED28Q9H204 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.64■□□□□ 0.73
MED28Q9H204 DUSP8P3-201ENST00000399571 1760 ntBASIC19.64■□□□□ 0.73
MED28Q9H204 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MED28Q9H204 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
MED28Q9H204 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MED28Q9H204 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MED28Q9H204 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.63■□□□□ 0.73
MED28Q9H204 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.63■□□□□ 0.73
MED28Q9H204 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.63■□□□□ 0.73
MED28Q9H204 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MED28Q9H204 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
MED28Q9H204 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MED28Q9H204 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.62■□□□□ 0.73
MED28Q9H204 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MED28Q9H204 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MED28Q9H204 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MED28Q9H204 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MED28Q9H204 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MED28Q9H204 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.61■□□□□ 0.73
MED28Q9H204 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MED28Q9H204 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
MED28Q9H204 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MED28Q9H204 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MED28Q9H204 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MED28Q9H204 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MED28Q9H204 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
MED28Q9H204 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MED28Q9H204 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MED28Q9H204 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.61■□□□□ 0.73
MED28Q9H204 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.6■□□□□ 0.73
MED28Q9H204 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MED28Q9H204 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MED28Q9H204 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MED28Q9H204 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MED28Q9H204 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MED28Q9H204 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MED28Q9H204 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MED28Q9H204 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.6■□□□□ 0.73
MED28Q9H204 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MED28Q9H204 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MED28Q9H204 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MED28Q9H204 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MED28Q9H204 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms