Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
DDX47Q9H0S4 AC007029.1-201ENST00000604183 313 ntBASIC24.06■■□□□ 1.44
DDX47Q9H0S4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX47Q9H0S4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.06■■□□□ 1.44
DDX47Q9H0S4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX47Q9H0S4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX47Q9H0S4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.06■■□□□ 1.44
DDX47Q9H0S4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX47Q9H0S4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
DDX47Q9H0S4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX47Q9H0S4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.05■■□□□ 1.44
DDX47Q9H0S4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
DDX47Q9H0S4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.05■■□□□ 1.44
DDX47Q9H0S4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX47Q9H0S4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.05■■□□□ 1.44
DDX47Q9H0S4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
DDX47Q9H0S4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 RAP2CP1-202ENST00000605179 643 ntBASIC24.04■■□□□ 1.44
DDX47Q9H0S4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DDX47Q9H0S4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
DDX47Q9H0S4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
DDX47Q9H0S4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DDX47Q9H0S4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX47Q9H0S4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.02■■□□□ 1.44
DDX47Q9H0S4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DDX47Q9H0S4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DDX47Q9H0S4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DDX47Q9H0S4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
DDX47Q9H0S4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
DDX47Q9H0S4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.02■■□□□ 1.44
DDX47Q9H0S4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.02■■□□□ 1.44
DDX47Q9H0S4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX47Q9H0S4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX47Q9H0S4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
DDX47Q9H0S4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
DDX47Q9H0S4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX47Q9H0S4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX47Q9H0S4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX47Q9H0S4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX47Q9H0S4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX47Q9H0S4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24■■□□□ 1.43
DDX47Q9H0S4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24■■□□□ 1.43
DDX47Q9H0S4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24■■□□□ 1.43
DDX47Q9H0S4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX47Q9H0S4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX47Q9H0S4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24■■□□□ 1.43
DDX47Q9H0S4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX47Q9H0S4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.99■■□□□ 1.43
DDX47Q9H0S4 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.99■■□□□ 1.43
DDX47Q9H0S4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.99■■□□□ 1.43
DDX47Q9H0S4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.99■■□□□ 1.43
DDX47Q9H0S4 AC026202.3-201ENST00000600805 1127 ntBASIC23.99■■□□□ 1.43
DDX47Q9H0S4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX47Q9H0S4 MIR639-201ENST00000384974 98 ntBASIC23.98■■□□□ 1.43
DDX47Q9H0S4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.98■■□□□ 1.43
DDX47Q9H0S4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX47Q9H0S4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX47Q9H0S4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
DDX47Q9H0S4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
DDX47Q9H0S4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX47Q9H0S4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX47Q9H0S4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX47Q9H0S4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX47Q9H0S4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX47Q9H0S4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX47Q9H0S4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.97■■□□□ 1.43
DDX47Q9H0S4 KRT18P10-201ENST00000388836 1287 ntBASIC23.97■■□□□ 1.43
DDX47Q9H0S4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
DDX47Q9H0S4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.97■■□□□ 1.43
DDX47Q9H0S4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX47Q9H0S4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX47Q9H0S4 MIR7108-201ENST00000614319 87 ntBASIC23.97■■□□□ 1.43
DDX47Q9H0S4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX47Q9H0S4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX47Q9H0S4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX47Q9H0S4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX47Q9H0S4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX47Q9H0S4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
DDX47Q9H0S4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX47Q9H0S4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
DDX47Q9H0S4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
DDX47Q9H0S4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
DDX47Q9H0S4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
DDX47Q9H0S4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
DDX47Q9H0S4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX47Q9H0S4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX47Q9H0S4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX47Q9H0S4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX47Q9H0S4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX47Q9H0S4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms