Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.726e-8■■■■□ 26.6
CSTF2TQ9H0L4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.576e-8■■■■□ 26.6
CSTF2TQ9H0L4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.26e-8■■■■□ 26.6
CSTF2TQ9H0L4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.61□□□□□ -0.076e-8■■■■□ 26.6
CSTF2TQ9H0L4 LARP1-204ENST00000518297 2630 ntTSL 520.03■□□□□ 0.83e-9■■■■□ 26.6
CSTF2TQ9H0L4 HBS1L-204ENST00000367826 2703 ntTSL 2 BASIC9.66□□□□□ -0.863e-7■■■■□ 26.6
CSTF2TQ9H0L4 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.113e-7■■■■□ 26.6
CSTF2TQ9H0L4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.95□□□□□ -1.33e-7■■■■□ 26.6
CSTF2TQ9H0L4 HBS1L-216ENST00000533274 2102 ntTSL 26.89□□□□□ -1.313e-7■■■■□ 26.6
CSTF2TQ9H0L4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.73□□□□□ -1.333e-7■■■■□ 26.6
CSTF2TQ9H0L4 HBS1L-209ENST00000526100 1600 ntTSL 24.55□□□□□ -1.683e-7■■■■□ 26.6
CSTF2TQ9H0L4 HBS1L-210ENST00000527005 2224 ntTSL 1 (best)4.01□□□□□ -1.773e-7■■■■□ 26.6
CSTF2TQ9H0L4 NET1-201ENST00000355029 3402 ntTSL 1 (best) BASIC10.38□□□□□ -0.756e-10■■■■□ 26.6
CSTF2TQ9H0L4 LRRC41-205ENST00000498402 2068 ntTSL 215.93■□□□□ 0.143e-10■■■■□ 26.6
CSTF2TQ9H0L4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.223e-10■■■■□ 26.6
CSTF2TQ9H0L4 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.69□□□□□ -0.383e-10■■■■□ 26.6
CSTF2TQ9H0L4 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.683e-10■■■■□ 26.6
CSTF2TQ9H0L4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.456e-8■■■■□ 26.5
CSTF2TQ9H0L4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.46e-8■■■■□ 26.5
CSTF2TQ9H0L4 TRAPPC12-209ENST00000441099 698 ntTSL 314.85□□□□□ -0.036e-8■■■■□ 26.5
CSTF2TQ9H0L4 TRAPPC12-210ENST00000441983 683 ntTSL 313.95□□□□□ -0.186e-8■■■■□ 26.5
CSTF2TQ9H0L4 TRAPPC12-207ENST00000433382 578 ntTSL 511.46□□□□□ -0.576e-8■■■■□ 26.5
CSTF2TQ9H0L4 TRAPPC12-218ENST00000479897 454 ntTSL 311.45□□□□□ -0.586e-8■■■■□ 26.5
CSTF2TQ9H0L4 TRAPPC12-206ENST00000417243 1047 ntTSL 511.45□□□□□ -0.586e-8■■■■□ 26.5
CSTF2TQ9H0L4 TRAPPC12-219ENST00000479955 420 ntTSL 310.81□□□□□ -0.686e-8■■■■□ 26.5
CSTF2TQ9H0L4 TRAPPC12-204ENST00000415624 815 ntAPPRIS ALT2 TSL 510.03□□□□□ -0.86e-8■■■■□ 26.5
CSTF2TQ9H0L4 SMAP2-201ENST00000372708 2473 ntTSL 1 (best)9.33□□□□□ -0.926e-8■■■■□ 26.5
CSTF2TQ9H0L4 TRAPPC12-215ENST00000469147 1002 ntTSL 38.89□□□□□ -0.996e-8■■■■□ 26.5
CSTF2TQ9H0L4 TRAPPC12-214ENST00000462983 543 ntTSL 48.51□□□□□ -1.056e-8■■■■□ 26.5
CSTF2TQ9H0L4 PRKAR1B-207ENST00000430040 1006 ntTSL 315.87■□□□□ 0.138e-7■■■■□ 26.5
CSTF2TQ9H0L4 MCPH1-AS1-202ENST00000522897 523 ntTSL 414.69□□□□□ -0.064e-6■■■■□ 26.5
CSTF2TQ9H0L4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.13□□□□□ -0.314e-6■■■■□ 26.5
CSTF2TQ9H0L4 MCPH1-AS1-204ENST00000527490 543 ntTSL 313.06□□□□□ -0.324e-6■■■■□ 26.5
CSTF2TQ9H0L4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.66■□□□□ 0.581e-9■■■■□ 26.5
CSTF2TQ9H0L4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.331e-9■■■■□ 26.5
CSTF2TQ9H0L4 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC11.69□□□□□ -0.544e-7■■■■□ 26.5
CSTF2TQ9H0L4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.334e-7■■■■□ 26.5
CSTF2TQ9H0L4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.544e-7■■■■□ 26.5
CSTF2TQ9H0L4 BCAT2-206ENST00000596981 569 ntTSL 49.44□□□□□ -0.92e-7■■■■□ 26.5
CSTF2TQ9H0L4 STRBP-203ENST00000407982 2751 ntTSL 1 (best)20.88■□□□□ 0.934e-8■■■■□ 26.5
CSTF2TQ9H0L4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.65■□□□□ 0.94e-8■■■■□ 26.5
CSTF2TQ9H0L4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.54e-8■■■■□ 26.5
CSTF2TQ9H0L4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.81e-7■■■■□ 26.5
CSTF2TQ9H0L4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.641e-7■■■■□ 26.5
CSTF2TQ9H0L4 HDGF-208ENST00000482651 966 ntTSL 38.19□□□□□ -1.11e-6■■■■□ 26.5
CSTF2TQ9H0L4 LMBR1-217ENST00000485985 644 ntTSL 219.64■□□□□ 0.731e-8■■■■□ 26.4
CSTF2TQ9H0L4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.41e-7■■■■□ 26.4
CSTF2TQ9H0L4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.351e-7■■■■□ 26.4
CSTF2TQ9H0L4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.231e-7■■■■□ 26.4
CSTF2TQ9H0L4 EIF5A-210ENST00000575001 609 ntTSL 222.14■■□□□ 1.131e-7■■■■□ 26.4
CSTF2TQ9H0L4 BPHL-206ENST00000430655 2157 ntTSL 1 (best)21.21■□□□□ 0.991e-7■■■■□ 26.4
CSTF2TQ9H0L4 BPHL-205ENST00000424847 1563 ntTSL 1 (best)20.65■□□□□ 0.91e-7■■■■□ 26.4
CSTF2TQ9H0L4 EIF5A-209ENST00000573714 602 ntTSL 319.55■□□□□ 0.721e-7■■■■□ 26.4
CSTF2TQ9H0L4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.721e-7■■■■□ 26.4
CSTF2TQ9H0L4 BPHL-207ENST00000433912 1063 ntTSL 218.55■□□□□ 0.561e-7■■■■□ 26.4
CSTF2TQ9H0L4 MAD1L1-205ENST00000421113 564 ntTSL 418.52■□□□□ 0.561e-7■■■■□ 26.4
CSTF2TQ9H0L4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.551e-7■■■■□ 26.4
CSTF2TQ9H0L4 LGI4-204ENST00000493050 2200 ntTSL 1 (best)17.11■□□□□ 0.331e-7■■■■□ 26.4
CSTF2TQ9H0L4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.6■□□□□ 0.251e-7■■■■□ 26.4
CSTF2TQ9H0L4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.171e-7■■■■□ 26.4
CSTF2TQ9H0L4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.03■□□□□ 0.161e-7■■■■□ 26.4
CSTF2TQ9H0L4 FBXL19-209ENST00000566320 546 ntTSL 515.8■□□□□ 0.121e-7■■■■□ 26.4
CSTF2TQ9H0L4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.23■□□□□ 0.031e-7■■■■□ 26.4
CSTF2TQ9H0L4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.021e-7■■■■□ 26.4
CSTF2TQ9H0L4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.021e-7■■■■□ 26.4
CSTF2TQ9H0L4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.011e-7■■■■□ 26.4
CSTF2TQ9H0L4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.85□□□□□ -0.031e-7■■■■□ 26.4
CSTF2TQ9H0L4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.091e-7■■■■□ 26.4
CSTF2TQ9H0L4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.48□□□□□ -0.091e-7■■■■□ 26.4
CSTF2TQ9H0L4 MAD1L1-210ENST00000444373 535 ntTSL 414.35□□□□□ -0.111e-7■■■■□ 26.4
CSTF2TQ9H0L4 FAM168A-205ENST00000632101 473 ntTSL 213.53□□□□□ -0.241e-7■■■■□ 26.4
CSTF2TQ9H0L4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13□□□□□ -0.331e-7■■■■□ 26.4
CSTF2TQ9H0L4 MAD1L1-209ENST00000438959 839 ntTSL 312.99□□□□□ -0.331e-7■■■■□ 26.4
CSTF2TQ9H0L4 RABGAP1L-209ENST00000457696 1847 ntTSL 1 (best)12.82□□□□□ -0.361e-7■■■■□ 26.4
CSTF2TQ9H0L4 HPCAL1-203ENST00000419810 4781 ntTSL 1 (best)12.8□□□□□ -0.361e-7■■■■□ 26.4
CSTF2TQ9H0L4 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.391e-7■■■■□ 26.4
CSTF2TQ9H0L4 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC11.51□□□□□ -0.571e-7■■■■□ 26.4
CSTF2TQ9H0L4 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC11.45□□□□□ -0.581e-7■■■■□ 26.4
CSTF2TQ9H0L4 AC006001.2-203ENST00000428557 304 ntTSL 311.16□□□□□ -0.621e-7■■■■□ 26.4
CSTF2TQ9H0L4 BPHL-211ENST00000488487 1137 ntTSL 510.9□□□□□ -0.661e-7■■■■□ 26.4
CSTF2TQ9H0L4 BPHL-212ENST00000490918 3723 ntTSL 210.6□□□□□ -0.711e-7■■■■□ 26.4
CSTF2TQ9H0L4 RABGAP1L-222ENST00000635248 3074 ntTSL 59.7□□□□□ -0.861e-7■■■■□ 26.4
CSTF2TQ9H0L4 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC8.9□□□□□ -0.981e-7■■■■□ 26.4
CSTF2TQ9H0L4 CEBPZOS-202ENST00000397064 568 ntAPPRIS P1 TSL 4 BASIC8.85□□□□□ -0.991e-7■■■■□ 26.4
CSTF2TQ9H0L4 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.36□□□□□ -1.071e-7■■■■□ 26.4
CSTF2TQ9H0L4 BPHL-204ENST00000423798 576 ntTSL 38.17□□□□□ -1.11e-7■■■■□ 26.4
CSTF2TQ9H0L4 RNMT-205ENST00000588457 1612 ntTSL 27.47□□□□□ -1.211e-7■■■■□ 26.4
CSTF2TQ9H0L4 RNMT-210ENST00000593007 811 ntTSL 46.46□□□□□ -1.381e-7■■■■□ 26.4
CSTF2TQ9H0L4 EIF5A-203ENST00000355068 923 ntTSL 26.25□□□□□ -1.411e-7■■■■□ 26.4
CSTF2TQ9H0L4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.471e-7■■■■□ 26.4
CSTF2TQ9H0L4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.521e-7■■■■□ 26.4
CSTF2TQ9H0L4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.541e-7■■■■□ 26.4
CSTF2TQ9H0L4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.651e-7■■■■□ 26.4
CSTF2TQ9H0L4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.44□□□□□ -1.71e-7■■■■□ 26.4
CSTF2TQ9H0L4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.16□□□□□ -0.32e-7■■■■□ 26.4
CSTF2TQ9H0L4 EIPR1-213ENST00000482570 582 ntTSL 210.84□□□□□ -0.679e-26■■■■□ 26.4
CSTF2TQ9H0L4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.183e-7■■■■□ 26.4
CSTF2TQ9H0L4 SLC38A10-207ENST00000542075 2903 ntTSL 213.47□□□□□ -0.253e-7■■■■□ 26.4
CSTF2TQ9H0L4 FAM222B-203ENST00000577376 720 ntTSL 223.56■■□□□ 1.362e-8■■■■□ 26.4
CSTF2TQ9H0L4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.88■■□□□ 1.252e-8■■■■□ 26.4
Retrieved 100 of 19,151 protein–RNA pairs in 245.6 ms