Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIMD2Q9BT23 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LIMD2Q9BT23 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIMD2Q9BT23 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIMD2Q9BT23 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIMD2Q9BT23 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIMD2Q9BT23 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIMD2Q9BT23 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 HSD17B1P1-201ENST00000590052 955 ntBASIC13.61□□□□□ -0.23
LIMD2Q9BT23 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 HYI-213ENST00000583037 1322 ntTSL 5 BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC13.61□□□□□ -0.23
LIMD2Q9BT23 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIMD2Q9BT23 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 HYI-210ENST00000486909 905 ntTSL 5 BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LIMD2Q9BT23 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LIMD2Q9BT23 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LIMD2Q9BT23 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 MIR6765-201ENST00000614092 87 ntBASIC13.58□□□□□ -0.24
LIMD2Q9BT23 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC13.58□□□□□ -0.24
LIMD2Q9BT23 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LIMD2Q9BT23 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LIMD2Q9BT23 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LIMD2Q9BT23 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms