Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDHD3Q9BSH5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDHD3Q9BSH5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDHD3Q9BSH5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDHD3Q9BSH5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.45■□□□□ 0.7
HDHD3Q9BSH5 MIR4449-201ENST00000578365 66 ntBASIC19.45■□□□□ 0.7
HDHD3Q9BSH5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDHD3Q9BSH5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 AC133552.2-201ENST00000619106 1032 ntBASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HDHD3Q9BSH5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HDHD3Q9BSH5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.42■□□□□ 0.7
HDHD3Q9BSH5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDHD3Q9BSH5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDHD3Q9BSH5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.42■□□□□ 0.7
HDHD3Q9BSH5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDHD3Q9BSH5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HDHD3Q9BSH5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDHD3Q9BSH5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDHD3Q9BSH5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDHD3Q9BSH5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDHD3Q9BSH5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDHD3Q9BSH5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HDHD3Q9BSH5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HDHD3Q9BSH5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HDHD3Q9BSH5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.4■□□□□ 0.7
HDHD3Q9BSH5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HDHD3Q9BSH5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.4■□□□□ 0.7
HDHD3Q9BSH5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HDHD3Q9BSH5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.4■□□□□ 0.7
HDHD3Q9BSH5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
HDHD3Q9BSH5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.39■□□□□ 0.7
HDHD3Q9BSH5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.39■□□□□ 0.7
HDHD3Q9BSH5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HDHD3Q9BSH5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HDHD3Q9BSH5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HDHD3Q9BSH5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDHD3Q9BSH5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.39■□□□□ 0.69
HDHD3Q9BSH5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDHD3Q9BSH5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
HDHD3Q9BSH5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HDHD3Q9BSH5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDHD3Q9BSH5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HDHD3Q9BSH5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDHD3Q9BSH5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDHD3Q9BSH5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms