Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S3Q96PC3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S3Q96PC3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S3Q96PC3 LINC01124-201ENST00000409786 2117 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 DUX4L13-201ENST00000554103 1267 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 DUX4L15-201ENST00000611059 1267 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 DUX4L23-201ENST00000615195 1269 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 DUX4L24-201ENST00000617576 1269 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 DUX4L22-201ENST00000618238 1269 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 DUX4L20-201ENST00000619712 1269 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 DUX4L21-201ENST00000622058 1269 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 DUX4L10-201ENST00000622460 1267 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 DUX4L25-201ENST00000624915 1269 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 AL359504.2-201ENST00000605506 1601 ntBASIC17.31■□□□□ 0.36
AP1S3Q96PC3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP1S3Q96PC3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.31■□□□□ 0.36
AP1S3Q96PC3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP1S3Q96PC3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.31■□□□□ 0.36
AP1S3Q96PC3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP1S3Q96PC3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 AC097639.1-201ENST00000565519 1891 ntBASIC17.29■□□□□ 0.36
AP1S3Q96PC3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
AP1S3Q96PC3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP1S3Q96PC3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S3Q96PC3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S3Q96PC3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
AP1S3Q96PC3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S3Q96PC3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S3Q96PC3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S3Q96PC3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP1S3Q96PC3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
AP1S3Q96PC3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP1S3Q96PC3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP1S3Q96PC3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP1S3Q96PC3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms