Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFAP54Q96N23 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFAP54Q96N23 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23■■□□□ 1.27
CFAP54Q96N23 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23■■□□□ 1.27
CFAP54Q96N23 CDCA4P2-201ENST00000441182 718 ntBASIC23■■□□□ 1.27
CFAP54Q96N23 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23■■□□□ 1.27
CFAP54Q96N23 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23■■□□□ 1.27
CFAP54Q96N23 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP54Q96N23 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CFAP54Q96N23 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.99■■□□□ 1.27
CFAP54Q96N23 DRD5P2-201ENST00000421395 2012 ntBASIC22.99■■□□□ 1.27
CFAP54Q96N23 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.99■■□□□ 1.27
CFAP54Q96N23 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP54Q96N23 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CFAP54Q96N23 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.98■■□□□ 1.27
CFAP54Q96N23 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP54Q96N23 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP54Q96N23 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CFAP54Q96N23 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP54Q96N23 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP54Q96N23 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CFAP54Q96N23 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.97■■□□□ 1.27
CFAP54Q96N23 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP54Q96N23 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CFAP54Q96N23 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP54Q96N23 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CFAP54Q96N23 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP54Q96N23 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.97■■□□□ 1.27
CFAP54Q96N23 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.97■■□□□ 1.27
CFAP54Q96N23 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CFAP54Q96N23 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CFAP54Q96N23 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CFAP54Q96N23 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.96■■□□□ 1.27
CFAP54Q96N23 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CFAP54Q96N23 LINC01003-201ENST00000564834 1764 ntBASIC22.96■■□□□ 1.27
CFAP54Q96N23 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CFAP54Q96N23 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CFAP54Q96N23 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CFAP54Q96N23 AL355802.2-201ENST00000402069 882 ntBASIC22.96■■□□□ 1.27
CFAP54Q96N23 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CFAP54Q96N23 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CFAP54Q96N23 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CFAP54Q96N23 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CFAP54Q96N23 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.95■■□□□ 1.27
CFAP54Q96N23 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
CFAP54Q96N23 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CFAP54Q96N23 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CFAP54Q96N23 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
CFAP54Q96N23 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CFAP54Q96N23 AC027612.3-201ENST00000413684 1047 ntBASIC22.95■■□□□ 1.26
CFAP54Q96N23 AC233992.3-201ENST00000607491 485 ntBASIC22.95■■□□□ 1.26
CFAP54Q96N23 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.95■■□□□ 1.26
CFAP54Q96N23 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.95■■□□□ 1.26
CFAP54Q96N23 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.95■■□□□ 1.26
CFAP54Q96N23 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.95■■□□□ 1.26
CFAP54Q96N23 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CFAP54Q96N23 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CFAP54Q96N23 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CFAP54Q96N23 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.94■■□□□ 1.26
CFAP54Q96N23 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CFAP54Q96N23 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CFAP54Q96N23 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.94■■□□□ 1.26
CFAP54Q96N23 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CFAP54Q96N23 AL499627.2-201ENST00000606283 725 ntBASIC22.94■■□□□ 1.26
CFAP54Q96N23 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CFAP54Q96N23 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.94■■□□□ 1.26
CFAP54Q96N23 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.94■■□□□ 1.26
CFAP54Q96N23 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.94■■□□□ 1.26
CFAP54Q96N23 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CFAP54Q96N23 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP54Q96N23 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CFAP54Q96N23 AC011298.3-201ENST00000615796 283 ntBASIC22.93■■□□□ 1.26
CFAP54Q96N23 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP54Q96N23 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP54Q96N23 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP54Q96N23 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.93■■□□□ 1.26
CFAP54Q96N23 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CFAP54Q96N23 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP54Q96N23 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CFAP54Q96N23 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP54Q96N23 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP54Q96N23 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.92■■□□□ 1.26
CFAP54Q96N23 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CFAP54Q96N23 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.92■■□□□ 1.26
CFAP54Q96N23 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.92■■□□□ 1.26
CFAP54Q96N23 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFAP54Q96N23 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CFAP54Q96N23 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CFAP54Q96N23 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.91■■□□□ 1.26
CFAP54Q96N23 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CFAP54Q96N23 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.9■■□□□ 1.26
CFAP54Q96N23 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.9■■□□□ 1.26
CFAP54Q96N23 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.9■■□□□ 1.26
CFAP54Q96N23 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CFAP54Q96N23 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CFAP54Q96N23 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CFAP54Q96N23 AC241377.3-202ENST00000626088 1088 ntBASIC22.9■■□□□ 1.26
CFAP54Q96N23 AC241585.3-202ENST00000628937 1088 ntBASIC22.9■■□□□ 1.26
CFAP54Q96N23 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.9■■□□□ 1.26
CFAP54Q96N23 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms