Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2FQ969M7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2FQ969M7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.05■□□□□ 0.96
UBE2FQ969M7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2FQ969M7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2FQ969M7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2FQ969M7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.05■□□□□ 0.96
UBE2FQ969M7 CR559946.2-201ENST00000623684 991 ntBASIC21.05■□□□□ 0.96
UBE2FQ969M7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2FQ969M7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2FQ969M7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2FQ969M7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2FQ969M7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.05■□□□□ 0.96
UBE2FQ969M7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2FQ969M7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.04■□□□□ 0.96
UBE2FQ969M7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2FQ969M7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2FQ969M7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2FQ969M7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2FQ969M7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
UBE2FQ969M7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2FQ969M7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.04■□□□□ 0.96
UBE2FQ969M7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2FQ969M7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
UBE2FQ969M7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.04■□□□□ 0.96
UBE2FQ969M7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2FQ969M7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.04■□□□□ 0.96
UBE2FQ969M7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2FQ969M7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2FQ969M7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2FQ969M7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2FQ969M7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2FQ969M7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.03■□□□□ 0.96
UBE2FQ969M7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2FQ969M7 C1orf229-201ENST00000623686 2258 ntBASIC21.03■□□□□ 0.96
UBE2FQ969M7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
UBE2FQ969M7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.02■□□□□ 0.96
UBE2FQ969M7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.02■□□□□ 0.96
UBE2FQ969M7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2FQ969M7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
UBE2FQ969M7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2FQ969M7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2FQ969M7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2FQ969M7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2FQ969M7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
UBE2FQ969M7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
UBE2FQ969M7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2FQ969M7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2FQ969M7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2FQ969M7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2FQ969M7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2FQ969M7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
UBE2FQ969M7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2FQ969M7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.01■□□□□ 0.95
UBE2FQ969M7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2FQ969M7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2FQ969M7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2FQ969M7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2FQ969M7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.01■□□□□ 0.95
UBE2FQ969M7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2FQ969M7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2FQ969M7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBE2FQ969M7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21■□□□□ 0.95
UBE2FQ969M7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2FQ969M7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UBE2FQ969M7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
UBE2FQ969M7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.99■□□□□ 0.95
UBE2FQ969M7 MIR3960-201ENST00000583311 91 ntBASIC20.99■□□□□ 0.95
UBE2FQ969M7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2FQ969M7 ANOS2P-203ENST00000472227 1816 ntBASIC20.99■□□□□ 0.95
UBE2FQ969M7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2FQ969M7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2FQ969M7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
UBE2FQ969M7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.98■□□□□ 0.95
UBE2FQ969M7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.98■□□□□ 0.95
UBE2FQ969M7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.98■□□□□ 0.95
UBE2FQ969M7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2FQ969M7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
UBE2FQ969M7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2FQ969M7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2FQ969M7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
UBE2FQ969M7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2FQ969M7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.97■□□□□ 0.95
UBE2FQ969M7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.97■□□□□ 0.95
UBE2FQ969M7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.97■□□□□ 0.95
UBE2FQ969M7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2FQ969M7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2FQ969M7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2FQ969M7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2FQ969M7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.97■□□□□ 0.95
UBE2FQ969M7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.96■□□□□ 0.95
UBE2FQ969M7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBE2FQ969M7 FOXO3B-201ENST00000395675 1928 ntBASIC20.96■□□□□ 0.95
UBE2FQ969M7 SMPD5-203ENST00000639008 1464 ntBASIC20.96■□□□□ 0.95
UBE2FQ969M7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBE2FQ969M7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBE2FQ969M7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBE2FQ969M7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.96■□□□□ 0.95
UBE2FQ969M7 MIR4449-201ENST00000578365 66 ntBASIC20.96■□□□□ 0.95
UBE2FQ969M7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms