Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 AC092068.2-201ENST00000590491 1708 ntBASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 AC007375.3-201ENST00000600936 2314 ntBASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MBD3L1Q8WWY6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 AC148477.6-201ENST00000623746 465 ntBASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MBD3L1Q8WWY6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 FOXO3B-201ENST00000395675 1928 ntBASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD3L1Q8WWY6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MBD3L1Q8WWY6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MBD3L1Q8WWY6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MBD3L1Q8WWY6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.1■□□□□ 0.49
MBD3L1Q8WWY6 MIR3665-201ENST00000578708 105 ntBASIC18.1■□□□□ 0.49
MBD3L1Q8WWY6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MBD3L1Q8WWY6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD3L1Q8WWY6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.09■□□□□ 0.49
MBD3L1Q8WWY6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MBD3L1Q8WWY6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD3L1Q8WWY6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD3L1Q8WWY6 AC008813.1-201ENST00000536597 885 ntBASIC18.09■□□□□ 0.49
MBD3L1Q8WWY6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD3L1Q8WWY6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MBD3L1Q8WWY6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MBD3L1Q8WWY6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.09■□□□□ 0.49
MBD3L1Q8WWY6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.08■□□□□ 0.49
MBD3L1Q8WWY6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.08■□□□□ 0.49
MBD3L1Q8WWY6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MBD3L1Q8WWY6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD3L1Q8WWY6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD3L1Q8WWY6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD3L1Q8WWY6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
MBD3L1Q8WWY6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD3L1Q8WWY6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD3L1Q8WWY6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MBD3L1Q8WWY6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MBD3L1Q8WWY6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD3L1Q8WWY6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD3L1Q8WWY6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.07■□□□□ 0.48
MBD3L1Q8WWY6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MBD3L1Q8WWY6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD3L1Q8WWY6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD3L1Q8WWY6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD3L1Q8WWY6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MBD3L1Q8WWY6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MBD3L1Q8WWY6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MBD3L1Q8WWY6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MBD3L1Q8WWY6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MBD3L1Q8WWY6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MBD3L1Q8WWY6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MBD3L1Q8WWY6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms