Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
RNF139Q8WU17 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF139Q8WU17 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.23■■□□□ 1.47
RNF139Q8WU17 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF139Q8WU17 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF139Q8WU17 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF139Q8WU17 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.23■■□□□ 1.47
RNF139Q8WU17 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RNF139Q8WU17 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.23■■□□□ 1.47
RNF139Q8WU17 TSPY9P-201ENST00000440215 945 ntBASIC24.23■■□□□ 1.47
RNF139Q8WU17 TSPY11P-201ENST00000442607 1045 ntBASIC24.23■■□□□ 1.47
RNF139Q8WU17 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.23■■□□□ 1.47
RNF139Q8WU17 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.23■■□□□ 1.47
RNF139Q8WU17 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF139Q8WU17 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.23■■□□□ 1.47
RNF139Q8WU17 AL139125.2-201ENST00000623134 1869 ntBASIC24.23■■□□□ 1.47
RNF139Q8WU17 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF139Q8WU17 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF139Q8WU17 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF139Q8WU17 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RNF139Q8WU17 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF139Q8WU17 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.22■■□□□ 1.47
RNF139Q8WU17 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.22■■□□□ 1.47
RNF139Q8WU17 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
RNF139Q8WU17 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
RNF139Q8WU17 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.21■■□□□ 1.47
RNF139Q8WU17 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF139Q8WU17 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF139Q8WU17 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF139Q8WU17 AC135731.1-201ENST00000569415 2548 ntBASIC24.21■■□□□ 1.47
RNF139Q8WU17 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF139Q8WU17 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF139Q8WU17 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
RNF139Q8WU17 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF139Q8WU17 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF139Q8WU17 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RNF139Q8WU17 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.2■■□□□ 1.46
RNF139Q8WU17 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.2■■□□□ 1.46
RNF139Q8WU17 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
RNF139Q8WU17 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.2■■□□□ 1.46
RNF139Q8WU17 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF139Q8WU17 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF139Q8WU17 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF139Q8WU17 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF139Q8WU17 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF139Q8WU17 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF139Q8WU17 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF139Q8WU17 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF139Q8WU17 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF139Q8WU17 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF139Q8WU17 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF139Q8WU17 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF139Q8WU17 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF139Q8WU17 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF139Q8WU17 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF139Q8WU17 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
RNF139Q8WU17 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF139Q8WU17 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF139Q8WU17 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
RNF139Q8WU17 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF139Q8WU17 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF139Q8WU17 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF139Q8WU17 UNC93B8-201ENST00000511903 705 ntBASIC24.17■■□□□ 1.46
RNF139Q8WU17 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RNF139Q8WU17 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF139Q8WU17 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF139Q8WU17 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF139Q8WU17 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF139Q8WU17 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF139Q8WU17 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF139Q8WU17 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF139Q8WU17 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.16■■□□□ 1.46
RNF139Q8WU17 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF139Q8WU17 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF139Q8WU17 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF139Q8WU17 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF139Q8WU17 MTDHP2-201ENST00000601468 714 ntBASIC24.16■■□□□ 1.46
RNF139Q8WU17 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF139Q8WU17 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
RNF139Q8WU17 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF139Q8WU17 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF139Q8WU17 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF139Q8WU17 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF139Q8WU17 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF139Q8WU17 KRT16P3-201ENST00000439127 1283 ntBASIC24.15■■□□□ 1.46
RNF139Q8WU17 AL356441.2-201ENST00000443009 864 ntBASIC24.15■■□□□ 1.46
RNF139Q8WU17 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF139Q8WU17 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF139Q8WU17 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RNF139Q8WU17 HLA-L-211ENST00000482052 1765 ntBASIC24.15■■□□□ 1.46
RNF139Q8WU17 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF139Q8WU17 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF139Q8WU17 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RNF139Q8WU17 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RNF139Q8WU17 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
RNF139Q8WU17 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
RNF139Q8WU17 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.14■■□□□ 1.45
RNF139Q8WU17 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
RNF139Q8WU17 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.14■■□□□ 1.45
RNF139Q8WU17 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms