Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM116Q8NCL8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM116Q8NCL8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM116Q8NCL8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 ABHD17AP5-201ENST00000580133 923 ntBASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM116Q8NCL8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM116Q8NCL8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM116Q8NCL8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.16■□□□□ 0.5
TMEM116Q8NCL8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM116Q8NCL8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM116Q8NCL8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TMEM116Q8NCL8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM116Q8NCL8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM116Q8NCL8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 RPS2P7-201ENST00000447334 885 ntBASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 AC018755.3-202ENST00000596210 929 ntBASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 U85056.1-201ENST00000616429 682 ntBASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM116Q8NCL8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TMEM116Q8NCL8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.14■□□□□ 0.49
TMEM116Q8NCL8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.14■□□□□ 0.49
TMEM116Q8NCL8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TMEM116Q8NCL8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TMEM116Q8NCL8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM116Q8NCL8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
TMEM116Q8NCL8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM116Q8NCL8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM116Q8NCL8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM116Q8NCL8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM116Q8NCL8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM116Q8NCL8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM116Q8NCL8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM116Q8NCL8 DUSP8P5-201ENST00000422884 1815 ntBASIC18.13■□□□□ 0.49
TMEM116Q8NCL8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM116Q8NCL8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM116Q8NCL8 AC012676.1-201ENST00000574705 1949 ntBASIC18.12■□□□□ 0.49
TMEM116Q8NCL8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM116Q8NCL8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM116Q8NCL8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM116Q8NCL8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM116Q8NCL8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM116Q8NCL8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM116Q8NCL8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM116Q8NCL8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM116Q8NCL8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEM116Q8NCL8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM116Q8NCL8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM116Q8NCL8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TMEM116Q8NCL8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM116Q8NCL8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 NTF6A-201ENST00000591175 560 ntBASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM116Q8NCL8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 AC090877.2-201ENST00000558441 1738 ntBASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TMEM116Q8NCL8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms