Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.66■■□□□ 1.38
KDM1BQ8NB78 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
KDM1BQ8NB78 AC142381.3-201ENST00000568208 1670 ntBASIC23.66■■□□□ 1.38
KDM1BQ8NB78 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.66■■□□□ 1.38
KDM1BQ8NB78 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM1BQ8NB78 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
KDM1BQ8NB78 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.65■■□□□ 1.38
KDM1BQ8NB78 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.65■■□□□ 1.38
KDM1BQ8NB78 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
KDM1BQ8NB78 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.64■■□□□ 1.38
KDM1BQ8NB78 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
KDM1BQ8NB78 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KDM1BQ8NB78 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM1BQ8NB78 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.64■■□□□ 1.37
KDM1BQ8NB78 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.64■■□□□ 1.37
KDM1BQ8NB78 MIR6722-201ENST00000617286 78 ntBASIC23.64■■□□□ 1.37
KDM1BQ8NB78 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KDM1BQ8NB78 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.63■■□□□ 1.37
KDM1BQ8NB78 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KDM1BQ8NB78 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.63■■□□□ 1.37
KDM1BQ8NB78 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KDM1BQ8NB78 SNX5-217ENST00000606557 1087 ntBASIC23.63■■□□□ 1.37
KDM1BQ8NB78 MIR6089-201ENST00000616698 64 ntBASIC23.63■■□□□ 1.37
KDM1BQ8NB78 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.63■■□□□ 1.37
KDM1BQ8NB78 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
KDM1BQ8NB78 SLC6A10P-202ENST00000431994 2058 ntBASIC23.63■■□□□ 1.37
KDM1BQ8NB78 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM1BQ8NB78 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KDM1BQ8NB78 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
KDM1BQ8NB78 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KDM1BQ8NB78 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.62■■□□□ 1.37
KDM1BQ8NB78 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.62■■□□□ 1.37
KDM1BQ8NB78 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KDM1BQ8NB78 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
KDM1BQ8NB78 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KDM1BQ8NB78 MIR3621-201ENST00000580529 85 ntBASIC23.61■■□□□ 1.37
KDM1BQ8NB78 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.61■■□□□ 1.37
KDM1BQ8NB78 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.61■■□□□ 1.37
KDM1BQ8NB78 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KDM1BQ8NB78 AC008406.3-201ENST00000620001 1374 ntBASIC23.61■■□□□ 1.37
KDM1BQ8NB78 AC022211.4-201ENST00000625094 2161 ntBASIC23.61■■□□□ 1.37
KDM1BQ8NB78 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
KDM1BQ8NB78 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
KDM1BQ8NB78 AL117332.1-201ENST00000622628 974 ntBASIC23.6■■□□□ 1.37
KDM1BQ8NB78 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
KDM1BQ8NB78 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KDM1BQ8NB78 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.6■■□□□ 1.37
KDM1BQ8NB78 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KDM1BQ8NB78 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
KDM1BQ8NB78 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.59■■□□□ 1.37
KDM1BQ8NB78 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.59■■□□□ 1.37
KDM1BQ8NB78 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KDM1BQ8NB78 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KDM1BQ8NB78 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
KDM1BQ8NB78 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
KDM1BQ8NB78 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KDM1BQ8NB78 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KDM1BQ8NB78 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
KDM1BQ8NB78 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
KDM1BQ8NB78 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.58■■□□□ 1.37
KDM1BQ8NB78 AC138932.3-201ENST00000567634 1902 ntBASIC23.58■■□□□ 1.37
KDM1BQ8NB78 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.58■■□□□ 1.36
KDM1BQ8NB78 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KDM1BQ8NB78 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.57■■□□□ 1.36
KDM1BQ8NB78 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.57■■□□□ 1.36
KDM1BQ8NB78 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.57■■□□□ 1.36
KDM1BQ8NB78 AL356740.2-201ENST00000601559 647 ntBASIC23.57■■□□□ 1.36
KDM1BQ8NB78 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
KDM1BQ8NB78 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KDM1BQ8NB78 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KDM1BQ8NB78 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.57■■□□□ 1.36
KDM1BQ8NB78 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
KDM1BQ8NB78 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
KDM1BQ8NB78 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
KDM1BQ8NB78 AC004448.1-201ENST00000458332 883 ntBASIC23.56■■□□□ 1.36
KDM1BQ8NB78 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.56■■□□□ 1.36
KDM1BQ8NB78 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.56■■□□□ 1.36
KDM1BQ8NB78 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM1BQ8NB78 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM1BQ8NB78 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM1BQ8NB78 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.55■■□□□ 1.36
KDM1BQ8NB78 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.55■■□□□ 1.36
KDM1BQ8NB78 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KDM1BQ8NB78 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.55■■□□□ 1.36
KDM1BQ8NB78 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.55■■□□□ 1.36
KDM1BQ8NB78 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.55■■□□□ 1.36
KDM1BQ8NB78 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM1BQ8NB78 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM1BQ8NB78 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.54■■□□□ 1.36
KDM1BQ8NB78 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM1BQ8NB78 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.54■■□□□ 1.36
KDM1BQ8NB78 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.54■■□□□ 1.36
KDM1BQ8NB78 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.53■■□□□ 1.36
KDM1BQ8NB78 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM1BQ8NB78 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM1BQ8NB78 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM1BQ8NB78 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.53■■□□□ 1.36
KDM1BQ8NB78 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
KDM1BQ8NB78 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.53■■□□□ 1.36
KDM1BQ8NB78 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms