Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71LQ8N9Z2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71LQ8N9Z2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC71LQ8N9Z2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71LQ8N9Z2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71LQ8N9Z2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC71LQ8N9Z2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC71LQ8N9Z2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC71LQ8N9Z2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC71LQ8N9Z2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC71LQ8N9Z2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CCDC71LQ8N9Z2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC71LQ8N9Z2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC71LQ8N9Z2 SMPD5-203ENST00000639008 1464 ntBASIC19.14■□□□□ 0.65
CCDC71LQ8N9Z2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC71LQ8N9Z2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 RPS2P35-201ENST00000443417 897 ntBASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC71LQ8N9Z2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 KRT18P10-201ENST00000388836 1287 ntBASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 C9orf163-202ENST00000624034 2573 ntBASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 FOXO3B-201ENST00000395675 1928 ntBASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 AL117328.2-201ENST00000624617 1940 ntBASIC19.12■□□□□ 0.65
CCDC71LQ8N9Z2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71LQ8N9Z2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71LQ8N9Z2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71LQ8N9Z2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71LQ8N9Z2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71LQ8N9Z2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC71LQ8N9Z2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71LQ8N9Z2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC71LQ8N9Z2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71LQ8N9Z2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71LQ8N9Z2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC71LQ8N9Z2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71LQ8N9Z2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71LQ8N9Z2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71LQ8N9Z2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC71LQ8N9Z2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71LQ8N9Z2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC71LQ8N9Z2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71LQ8N9Z2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC71LQ8N9Z2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71LQ8N9Z2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71LQ8N9Z2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71LQ8N9Z2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC71LQ8N9Z2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71LQ8N9Z2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71LQ8N9Z2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC71LQ8N9Z2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71LQ8N9Z2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71LQ8N9Z2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC71LQ8N9Z2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CCDC71LQ8N9Z2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.08■□□□□ 0.65
CCDC71LQ8N9Z2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC71LQ8N9Z2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC71LQ8N9Z2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC71LQ8N9Z2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC71LQ8N9Z2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC71LQ8N9Z2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC71LQ8N9Z2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC71LQ8N9Z2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC71LQ8N9Z2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC71LQ8N9Z2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC71LQ8N9Z2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 AC060814.1-201ENST00000554326 538 ntBASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms