Protein–RNA interactions for Protein: Q8N8D7

NKAIN3, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKAIN3Q8N8D7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NKAIN3Q8N8D7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKAIN3Q8N8D7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.91■□□□□ 0.78
NKAIN3Q8N8D7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NKAIN3Q8N8D7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKAIN3Q8N8D7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
NKAIN3Q8N8D7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKAIN3Q8N8D7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NKAIN3Q8N8D7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKAIN3Q8N8D7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKAIN3Q8N8D7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NKAIN3Q8N8D7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
NKAIN3Q8N8D7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NKAIN3Q8N8D7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NKAIN3Q8N8D7 AL161729.1-201ENST00000604104 1402 ntBASIC19.89■□□□□ 0.77
NKAIN3Q8N8D7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NKAIN3Q8N8D7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 MIR7108-201ENST00000614319 87 ntBASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKAIN3Q8N8D7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKAIN3Q8N8D7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NKAIN3Q8N8D7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKAIN3Q8N8D7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 C9orf163-202ENST00000624034 2573 ntBASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKAIN3Q8N8D7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKAIN3Q8N8D7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms