Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC9BQ8N6N2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC9BQ8N6N2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TTC9BQ8N6N2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TTC9BQ8N6N2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TTC9BQ8N6N2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC9BQ8N6N2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.42■■□□□ 1.5
TTC9BQ8N6N2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.42■■□□□ 1.5
TTC9BQ8N6N2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TTC9BQ8N6N2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.42■■□□□ 1.5
TTC9BQ8N6N2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TTC9BQ8N6N2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TTC9BQ8N6N2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC9BQ8N6N2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC9BQ8N6N2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
TTC9BQ8N6N2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC9BQ8N6N2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC9BQ8N6N2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC9BQ8N6N2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
TTC9BQ8N6N2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.41■■□□□ 1.5
TTC9BQ8N6N2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TTC9BQ8N6N2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TTC9BQ8N6N2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.39■■□□□ 1.5
TTC9BQ8N6N2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.39■■□□□ 1.5
TTC9BQ8N6N2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC9BQ8N6N2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TTC9BQ8N6N2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC9BQ8N6N2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TTC9BQ8N6N2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TTC9BQ8N6N2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC9BQ8N6N2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
TTC9BQ8N6N2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC9BQ8N6N2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC9BQ8N6N2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC9BQ8N6N2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.38■■□□□ 1.49
TTC9BQ8N6N2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
TTC9BQ8N6N2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.38■■□□□ 1.49
TTC9BQ8N6N2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TTC9BQ8N6N2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC9BQ8N6N2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 AC110285.6-201ENST00000617652 491 ntBASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TTC9BQ8N6N2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TTC9BQ8N6N2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TTC9BQ8N6N2 MIR638-201ENST00000385237 100 ntBASIC24.36■■□□□ 1.49
TTC9BQ8N6N2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TTC9BQ8N6N2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TTC9BQ8N6N2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TTC9BQ8N6N2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TTC9BQ8N6N2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.35■■□□□ 1.49
TTC9BQ8N6N2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TTC9BQ8N6N2 AC096631.2-201ENST00000436136 790 ntBASIC24.34■■□□□ 1.49
TTC9BQ8N6N2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.34■■□□□ 1.49
TTC9BQ8N6N2 AL139246.5-201ENST00000606645 996 ntBASIC24.34■■□□□ 1.49
TTC9BQ8N6N2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.34■■□□□ 1.49
TTC9BQ8N6N2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TTC9BQ8N6N2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.34■■□□□ 1.49
TTC9BQ8N6N2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TTC9BQ8N6N2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TTC9BQ8N6N2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.33■■□□□ 1.49
TTC9BQ8N6N2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TTC9BQ8N6N2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.33■■□□□ 1.49
TTC9BQ8N6N2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.33■■□□□ 1.49
TTC9BQ8N6N2 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.33■■□□□ 1.49
TTC9BQ8N6N2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TTC9BQ8N6N2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TTC9BQ8N6N2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TTC9BQ8N6N2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC9BQ8N6N2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC9BQ8N6N2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC9BQ8N6N2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.32■■□□□ 1.48
TTC9BQ8N6N2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TTC9BQ8N6N2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.32■■□□□ 1.48
TTC9BQ8N6N2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.32■■□□□ 1.48
TTC9BQ8N6N2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TTC9BQ8N6N2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TTC9BQ8N6N2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TTC9BQ8N6N2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TTC9BQ8N6N2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.31■■□□□ 1.48
TTC9BQ8N6N2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms