Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.74■■□□□ 1.39
SIX5Q8N196 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SIX5Q8N196 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.73■■□□□ 1.39
SIX5Q8N196 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SIX5Q8N196 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.73■■□□□ 1.39
SIX5Q8N196 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SIX5Q8N196 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SIX5Q8N196 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SIX5Q8N196 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SIX5Q8N196 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.72■■□□□ 1.39
SIX5Q8N196 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.72■■□□□ 1.39
SIX5Q8N196 AC099791.2-201ENST00000605725 427 ntBASIC23.72■■□□□ 1.39
SIX5Q8N196 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.72■■□□□ 1.39
SIX5Q8N196 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.72■■□□□ 1.39
SIX5Q8N196 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.72■■□□□ 1.39
SIX5Q8N196 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
SIX5Q8N196 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SIX5Q8N196 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SIX5Q8N196 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SIX5Q8N196 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.71■■□□□ 1.39
SIX5Q8N196 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SIX5Q8N196 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.7■■□□□ 1.39
SIX5Q8N196 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
SIX5Q8N196 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SIX5Q8N196 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
SIX5Q8N196 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
SIX5Q8N196 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.7■■□□□ 1.38
SIX5Q8N196 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.7■■□□□ 1.38
SIX5Q8N196 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.7■■□□□ 1.38
SIX5Q8N196 IKBKGP1-201ENST00000612193 1073 ntBASIC23.7■■□□□ 1.38
SIX5Q8N196 AC011298.3-201ENST00000615796 283 ntBASIC23.7■■□□□ 1.38
SIX5Q8N196 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SIX5Q8N196 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SIX5Q8N196 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SIX5Q8N196 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.69■■□□□ 1.38
SIX5Q8N196 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.69■■□□□ 1.38
SIX5Q8N196 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.69■■□□□ 1.38
SIX5Q8N196 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.69■■□□□ 1.38
SIX5Q8N196 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SIX5Q8N196 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.68■■□□□ 1.38
SIX5Q8N196 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SIX5Q8N196 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SIX5Q8N196 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SIX5Q8N196 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.67■■□□□ 1.38
SIX5Q8N196 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SIX5Q8N196 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SIX5Q8N196 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.67■■□□□ 1.38
SIX5Q8N196 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SIX5Q8N196 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.67■■□□□ 1.38
SIX5Q8N196 AL138724.1-201ENST00000606771 1088 ntBASIC23.67■■□□□ 1.38
SIX5Q8N196 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SIX5Q8N196 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SIX5Q8N196 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SIX5Q8N196 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SIX5Q8N196 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SIX5Q8N196 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.66■■□□□ 1.38
SIX5Q8N196 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SIX5Q8N196 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SIX5Q8N196 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.66■■□□□ 1.38
SIX5Q8N196 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.66■■□□□ 1.38
SIX5Q8N196 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SIX5Q8N196 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SIX5Q8N196 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.66■■□□□ 1.38
SIX5Q8N196 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SIX5Q8N196 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SIX5Q8N196 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SIX5Q8N196 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.65■■□□□ 1.38
SIX5Q8N196 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SIX5Q8N196 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.65■■□□□ 1.38
SIX5Q8N196 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SIX5Q8N196 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SIX5Q8N196 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SIX5Q8N196 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SIX5Q8N196 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SIX5Q8N196 AC022517.1-201ENST00000592429 346 ntBASIC23.65■■□□□ 1.38
SIX5Q8N196 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.65■■□□□ 1.38
SIX5Q8N196 AL137784.2-201ENST00000607332 1000 ntBASIC23.65■■□□□ 1.38
SIX5Q8N196 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.65■■□□□ 1.38
SIX5Q8N196 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SIX5Q8N196 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SIX5Q8N196 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SIX5Q8N196 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SIX5Q8N196 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SIX5Q8N196 AC034268.1-201ENST00000441047 882 ntBASIC23.64■■□□□ 1.37
SIX5Q8N196 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
SIX5Q8N196 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.64■■□□□ 1.37
SIX5Q8N196 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.64■■□□□ 1.37
SIX5Q8N196 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SIX5Q8N196 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SIX5Q8N196 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SIX5Q8N196 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SIX5Q8N196 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SIX5Q8N196 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SIX5Q8N196 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SIX5Q8N196 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SIX5Q8N196 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SIX5Q8N196 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SIX5Q8N196 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SIX5Q8N196 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.62■■□□□ 1.37
SIX5Q8N196 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms