Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC144CPQ8IYA2 MIR4787-201ENST00000607364 84 ntBASIC27.26■■□□□ 1.95
CCDC144CPQ8IYA2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC144CPQ8IYA2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.26■■□□□ 1.95
CCDC144CPQ8IYA2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.26■■□□□ 1.95
CCDC144CPQ8IYA2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC144CPQ8IYA2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC144CPQ8IYA2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CCDC144CPQ8IYA2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CCDC144CPQ8IYA2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC144CPQ8IYA2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC144CPQ8IYA2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC144CPQ8IYA2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC144CPQ8IYA2 HLA-L-211ENST00000482052 1765 ntBASIC27.23■■□□□ 1.95
CCDC144CPQ8IYA2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.23■■□□□ 1.95
CCDC144CPQ8IYA2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC144CPQ8IYA2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
CCDC144CPQ8IYA2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.22■■□□□ 1.95
CCDC144CPQ8IYA2 AL139125.2-201ENST00000623134 1869 ntBASIC27.22■■□□□ 1.95
CCDC144CPQ8IYA2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCDC144CPQ8IYA2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.22■■□□□ 1.95
CCDC144CPQ8IYA2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCDC144CPQ8IYA2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.22■■□□□ 1.95
CCDC144CPQ8IYA2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.22■■□□□ 1.95
CCDC144CPQ8IYA2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CCDC144CPQ8IYA2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 AC011551.1-201ENST00000614101 683 ntBASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC144CPQ8IYA2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.2■■□□□ 1.95
CCDC144CPQ8IYA2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CCDC144CPQ8IYA2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.2■■□□□ 1.94
CCDC144CPQ8IYA2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CCDC144CPQ8IYA2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC144CPQ8IYA2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.19■■□□□ 1.94
CCDC144CPQ8IYA2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.19■■□□□ 1.94
CCDC144CPQ8IYA2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.19■■□□□ 1.94
CCDC144CPQ8IYA2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.19■■□□□ 1.94
CCDC144CPQ8IYA2 MIR4281-201ENST00000580852 62 ntBASIC27.19■■□□□ 1.94
CCDC144CPQ8IYA2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC144CPQ8IYA2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.19■■□□□ 1.94
CCDC144CPQ8IYA2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC144CPQ8IYA2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC144CPQ8IYA2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.18■■□□□ 1.94
CCDC144CPQ8IYA2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC144CPQ8IYA2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC144CPQ8IYA2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.18■■□□□ 1.94
CCDC144CPQ8IYA2 UNC93B8-201ENST00000511903 705 ntBASIC27.18■■□□□ 1.94
CCDC144CPQ8IYA2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC144CPQ8IYA2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC144CPQ8IYA2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC144CPQ8IYA2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.17■■□□□ 1.94
CCDC144CPQ8IYA2 AC137630.3-201ENST00000607245 391 ntBASIC27.17■■□□□ 1.94
CCDC144CPQ8IYA2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC144CPQ8IYA2 LINC01124-201ENST00000409786 2117 ntBASIC27.17■■□□□ 1.94
CCDC144CPQ8IYA2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC144CPQ8IYA2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
CCDC144CPQ8IYA2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144CPQ8IYA2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144CPQ8IYA2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144CPQ8IYA2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC144CPQ8IYA2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC144CPQ8IYA2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC144CPQ8IYA2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.15■■□□□ 1.94
CCDC144CPQ8IYA2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC144CPQ8IYA2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC144CPQ8IYA2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC144CPQ8IYA2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC144CPQ8IYA2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.15■■□□□ 1.94
CCDC144CPQ8IYA2 AC019069.1-201ENST00000610008 1333 ntBASIC27.15■■□□□ 1.94
CCDC144CPQ8IYA2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC144CPQ8IYA2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.14■■□□□ 1.94
CCDC144CPQ8IYA2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC144CPQ8IYA2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC144CPQ8IYA2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC144CPQ8IYA2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.14■■□□□ 1.94
CCDC144CPQ8IYA2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.14■■□□□ 1.94
CCDC144CPQ8IYA2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CCDC144CPQ8IYA2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CCDC144CPQ8IYA2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.14■■□□□ 1.93
CCDC144CPQ8IYA2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC144CPQ8IYA2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms