Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 HNRNPH1-225ENST00000515158 850 ntTSL 416.67■□□□□ 0.266e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16■□□□□ 0.156e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-226ENST00000515446 368 ntTSL 215.95■□□□□ 0.146e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-213ENST00000505811 1155 ntTSL 515.85■□□□□ 0.136e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.16e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.056e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-249ENST00000524180 997 ntTSL 515□□□□□ -0.016e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-220ENST00000513225 805 ntTSL 414.9□□□□□ -0.026e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.076e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-224ENST00000514731 1371 ntTSL 214.48□□□□□ -0.096e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-218ENST00000510678 1996 ntTSL 514.42□□□□□ -0.16e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC14.33□□□□□ -0.126e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-215ENST00000508103 610 ntTSL 214.32□□□□□ -0.126e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-209ENST00000504348 594 ntTSL 414.27□□□□□ -0.136e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-223ENST00000514332 2444 ntTSL 214.15□□□□□ -0.146e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-211ENST00000504779 792 ntTSL 514.1□□□□□ -0.156e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-214ENST00000506721 602 ntTSL 514.08□□□□□ -0.166e-33■□□□□ 8.7
DDX42Q86XP3 CDK5RAP3-213ENST00000579605 560 ntTSL 414.06□□□□□ -0.161e-11■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-217ENST00000510431 620 ntTSL 213.98□□□□□ -0.176e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-234ENST00000519707 582 ntTSL 213.98□□□□□ -0.176e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-233ENST00000519455 451 ntTSL 413.94□□□□□ -0.186e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-222ENST00000513972 761 ntTSL 213.38□□□□□ -0.276e-33■□□□□ 8.7
DDX42Q86XP3 CDK5RAP3-222ENST00000581708 543 ntTSL 413.36□□□□□ -0.271e-11■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-232ENST00000519056 530 ntTSL 412.82□□□□□ -0.366e-33■□□□□ 8.7
DDX42Q86XP3 CDK5RAP3-204ENST00000577664 568 ntTSL 411.55□□□□□ -0.561e-11■□□□□ 8.7
DDX42Q86XP3 CDK5RAP3-214ENST00000579632 738 ntTSL 410.94□□□□□ -0.661e-11■□□□□ 8.7
DDX42Q86XP3 CDK5RAP3-227ENST00000583352 901 ntTSL 310.3□□□□□ -0.761e-11■□□□□ 8.7
DDX42Q86XP3 CDK5RAP3-208ENST00000578525 564 ntTSL 410.05□□□□□ -0.81e-11■□□□□ 8.7
DDX42Q86XP3 CDK5RAP3-220ENST00000581160 490 ntTSL 39.51□□□□□ -0.891e-11■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-219ENST00000512273 501 ntTSL 49.19□□□□□ -0.946e-33■□□□□ 8.7
DDX42Q86XP3 SRRT-201ENST00000423692 727 ntTSL 515.63■□□□□ 0.095e-7■□□□□ 8.7
DDX42Q86XP3 SRRT-219ENST00000641476 992 nt15.48■□□□□ 0.075e-7■□□□□ 8.7
DDX42Q86XP3 MALAT1-202ENST00000534336 8708 ntBASIC10.31□□□□□ -0.761e-323■□□□□ 8.7
DDX42Q86XP3 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.39□□□□□ -1.071e-323■□□□□ 8.7
DDX42Q86XP3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.99□□□□□ -1.611e-323■□□□□ 8.7
DDX42Q86XP3 CCNL2-220ENST00000505849 1503 ntTSL 216.26■□□□□ 0.191e-25■□□□□ 8.7
DDX42Q86XP3 CCNL2-208ENST00000469113 707 ntTSL 314.56□□□□□ -0.081e-25■□□□□ 8.7
DDX42Q86XP3 CCNL2-214ENST00000482365 2620 ntTSL 214.45□□□□□ -0.11e-25■□□□□ 8.7
DDX42Q86XP3 CCNL2-204ENST00000418865 3082 ntTSL 1 (best)11.41□□□□□ -0.581e-25■□□□□ 8.7
DDX42Q86XP3 YARS-207ENST00000481895 1018 ntTSL 521.2■□□□□ 0.982e-10■□□□□ 8.6
DDX42Q86XP3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.392e-10■□□□□ 8.6
DDX42Q86XP3 YARS-206ENST00000478828 1044 ntTSL 212.03□□□□□ -0.482e-10■□□□□ 8.6
DDX42Q86XP3 YARS-210ENST00000616261 1167 ntTSL 5 BASIC9.62□□□□□ -0.872e-10■□□□□ 8.6
DDX42Q86XP3 EIF4G2-207ENST00000525995 592 ntTSL 422.73■■□□□ 1.238e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-203ENST00000524932 1286 ntTSL 522.08■■□□□ 1.138e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-228ENST00000534246 523 ntTSL 216.76■□□□□ 0.278e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-210ENST00000527419 571 ntTSL 516.15■□□□□ 0.188e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-216ENST00000530702 563 ntTSL 214.21□□□□□ -0.138e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-221ENST00000532082 1069 ntTSL 1 (best)11.86□□□□□ -0.518e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-214ENST00000530211 591 ntTSL 211.85□□□□□ -0.518e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-219ENST00000531507 591 ntTSL 511.03□□□□□ -0.648e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-226ENST00000532570 573 ntTSL 510.68□□□□□ -0.78e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.758e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-212ENST00000528562 601 ntTSL 48.92□□□□□ -0.988e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.998e-14■□□□□ 8.6
DDX42Q86XP3 EIF4G2-206ENST00000525972 584 ntTSL 26.68□□□□□ -1.348e-14■□□□□ 8.6
DDX42Q86XP3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.844e-9■□□□□ 8.5
DDX42Q86XP3 PTPN12-209ENST00000460731 582 ntTSL 25.84□□□□□ -1.474e-9■□□□□ 8.5
DDX42Q86XP3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.9□□□□□ -0.022e-24■□□□□ 8.5
DDX42Q86XP3 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.762e-24■□□□□ 8.5
DDX42Q86XP3 MAN2A2-228ENST00000561047 1057 ntTSL 519.02■□□□□ 0.642e-7■□□□□ 8.5
DDX42Q86XP3 MAN2A2-213ENST00000559374 851 ntTSL 517.66■□□□□ 0.422e-7■□□□□ 8.5
DDX42Q86XP3 MAN2A2-230ENST00000561448 1443 ntTSL 211.99□□□□□ -0.492e-7■□□□□ 8.5
DDX42Q86XP3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.93■□□□□ 0.782e-12■□□□□ 8.5
DDX42Q86XP3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.762e-12■□□□□ 8.5
DDX42Q86XP3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.612e-12■□□□□ 8.5
DDX42Q86XP3 MAPK8IP3-203ENST00000561765 2374 ntTSL 1 (best)17.04■□□□□ 0.322e-12■□□□□ 8.5
DDX42Q86XP3 MAPK8IP3-207ENST00000564098 4436 ntTSL 216.75■□□□□ 0.272e-12■□□□□ 8.5
DDX42Q86XP3 MAPK8IP3-213ENST00000568271 752 ntTSL 515.37■□□□□ 0.052e-12■□□□□ 8.5
DDX42Q86XP3 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.94□□□□□ -1.34e-24■□□□□ 8.5
DDX42Q86XP3 AC015574.1-204ENST00000612595 512 ntTSL 55.32□□□□□ -1.564e-24■□□□□ 8.5
DDX42Q86XP3 TRA2A-204ENST00000474586 868 ntTSL 322.44■■□□□ 1.181e-7■□□□□ 8.5
DDX42Q86XP3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.931e-7■□□□□ 8.5
DDX42Q86XP3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.691e-7■□□□□ 8.5
DDX42Q86XP3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.561e-7■□□□□ 8.5
DDX42Q86XP3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.361e-7■□□□□ 8.5
DDX42Q86XP3 TRA2A-208ENST00000490942 862 ntTSL 1 (best)16.6■□□□□ 0.251e-7■□□□□ 8.5
DDX42Q86XP3 TRA2A-203ENST00000448549 582 ntTSL 416.5■□□□□ 0.231e-7■□□□□ 8.5
DDX42Q86XP3 TRA2A-209ENST00000494255 1653 ntTSL 1 (best)13.09□□□□□ -0.311e-7■□□□□ 8.5
DDX42Q86XP3 SLC25A37-201ENST00000290075 1889 ntTSL 1 (best)22.22■■□□□ 1.154e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-202ENST00000417331 735 ntTSL 520.64■□□□□ 0.894e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-209ENST00000521637 503 ntTSL 318.73■□□□□ 0.594e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-210ENST00000522164 571 ntTSL 217.83■□□□□ 0.444e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.284e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-212ENST00000523930 823 ntTSL 516.02■□□□□ 0.164e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-204ENST00000518881 3404 ntTSL 1 (best)15.64■□□□□ 0.094e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-211ENST00000523883 3651 ntTSL 211.02□□□□□ -0.654e-53■□□□□ 8.5
DDX42Q86XP3 SLC25A37-207ENST00000520654 3018 ntTSL 1 (best)9.98□□□□□ -0.814e-53■□□□□ 8.5
DDX42Q86XP3 PTTG1IP-206ENST00000480234 398 ntTSL 321.39■■□□□ 1.019e-8■□□□□ 8.4
DDX42Q86XP3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.2■□□□□ 0.829e-8■□□□□ 8.4
DDX42Q86XP3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.769e-8■□□□□ 8.4
DDX42Q86XP3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.78■□□□□ 0.769e-8■□□□□ 8.4
DDX42Q86XP3 WSB1-206ENST00000578312 692 ntTSL 416.16■□□□□ 0.183e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-214ENST00000583742 544 ntTSL 416.16■□□□□ 0.183e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-217ENST00000584354 544 ntTSL 216.14■□□□□ 0.173e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC12.82□□□□□ -0.363e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC12.77□□□□□ -0.373e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC12.7□□□□□ -0.383e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-213ENST00000583193 552 ntTSL 4 BASIC12.7□□□□□ -0.383e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-215ENST00000583786 481 ntTSL 512.36□□□□□ -0.433e-11■□□□□ 8.4
Retrieved 100 of 2,477 protein–RNA pairs in 77.2 ms