Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.52■■□□□ 1.52
TTC30AQ86WT1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC30AQ86WT1 BX664725.1-201ENST00000438252 379 ntBASIC24.52■■□□□ 1.52
TTC30AQ86WT1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TTC30AQ86WT1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TTC30AQ86WT1 AC021242.3-201ENST00000607598 1377 ntBASIC24.52■■□□□ 1.52
TTC30AQ86WT1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TTC30AQ86WT1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC30AQ86WT1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC30AQ86WT1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
TTC30AQ86WT1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC30AQ86WT1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.51■■□□□ 1.51
TTC30AQ86WT1 Z92544.1-202ENST00000571933 1220 ntBASIC24.51■■□□□ 1.51
TTC30AQ86WT1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC30AQ86WT1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.51■■□□□ 1.51
TTC30AQ86WT1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.51■■□□□ 1.51
TTC30AQ86WT1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
TTC30AQ86WT1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.5■■□□□ 1.51
TTC30AQ86WT1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.5■■□□□ 1.51
TTC30AQ86WT1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.5■■□□□ 1.51
TTC30AQ86WT1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.5■■□□□ 1.51
TTC30AQ86WT1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TTC30AQ86WT1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TTC30AQ86WT1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC30AQ86WT1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.49■■□□□ 1.51
TTC30AQ86WT1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.49■■□□□ 1.51
TTC30AQ86WT1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
TTC30AQ86WT1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.49■■□□□ 1.51
TTC30AQ86WT1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
TTC30AQ86WT1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC30AQ86WT1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TTC30AQ86WT1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC30AQ86WT1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
TTC30AQ86WT1 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.48■■□□□ 1.51
TTC30AQ86WT1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.48■■□□□ 1.51
TTC30AQ86WT1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
TTC30AQ86WT1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.48■■□□□ 1.51
TTC30AQ86WT1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC30AQ86WT1 AC131274.2-201ENST00000580697 1507 ntBASIC24.47■■□□□ 1.51
TTC30AQ86WT1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC30AQ86WT1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC30AQ86WT1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
TTC30AQ86WT1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC30AQ86WT1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
TTC30AQ86WT1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
TTC30AQ86WT1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC30AQ86WT1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TTC30AQ86WT1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.47■■□□□ 1.51
TTC30AQ86WT1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TTC30AQ86WT1 AC019069.1-201ENST00000610008 1333 ntBASIC24.46■■□□□ 1.51
TTC30AQ86WT1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TTC30AQ86WT1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.46■■□□□ 1.51
TTC30AQ86WT1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.46■■□□□ 1.51
TTC30AQ86WT1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TTC30AQ86WT1 LINC01124-201ENST00000409786 2117 ntBASIC24.46■■□□□ 1.51
TTC30AQ86WT1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TTC30AQ86WT1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.46■■□□□ 1.51
TTC30AQ86WT1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TTC30AQ86WT1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TTC30AQ86WT1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
TTC30AQ86WT1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TTC30AQ86WT1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TTC30AQ86WT1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.45■■□□□ 1.5
TTC30AQ86WT1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TTC30AQ86WT1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.45■■□□□ 1.5
TTC30AQ86WT1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TTC30AQ86WT1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
TTC30AQ86WT1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.44■■□□□ 1.5
TTC30AQ86WT1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TTC30AQ86WT1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TTC30AQ86WT1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.44■■□□□ 1.5
TTC30AQ86WT1 KRT125P-201ENST00000546827 989 ntBASIC24.44■■□□□ 1.5
TTC30AQ86WT1 MIR4787-201ENST00000607364 84 ntBASIC24.44■■□□□ 1.5
TTC30AQ86WT1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.44■■□□□ 1.5
TTC30AQ86WT1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
TTC30AQ86WT1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC30AQ86WT1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.43■■□□□ 1.5
TTC30AQ86WT1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC30AQ86WT1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC30AQ86WT1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.43■■□□□ 1.5
TTC30AQ86WT1 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.43■■□□□ 1.5
TTC30AQ86WT1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC30AQ86WT1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.43■■□□□ 1.5
TTC30AQ86WT1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TTC30AQ86WT1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC30AQ86WT1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
TTC30AQ86WT1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC30AQ86WT1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC30AQ86WT1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.42■■□□□ 1.5
TTC30AQ86WT1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC30AQ86WT1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.42■■□□□ 1.5
TTC30AQ86WT1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC30AQ86WT1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC30AQ86WT1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TTC30AQ86WT1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC30AQ86WT1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC30AQ86WT1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC30AQ86WT1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TTC30AQ86WT1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC30AQ86WT1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms