Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf139Q6ZV77 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
C9orf139Q6ZV77 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
C9orf139Q6ZV77 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.69■□□□□ 0.58
C9orf139Q6ZV77 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
C9orf139Q6ZV77 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.69■□□□□ 0.58
C9orf139Q6ZV77 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf139Q6ZV77 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf139Q6ZV77 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.69■□□□□ 0.58
C9orf139Q6ZV77 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf139Q6ZV77 AC005837.3-201ENST00000612163 286 ntBASIC18.69■□□□□ 0.58
C9orf139Q6ZV77 MIR6089-201ENST00000616698 64 ntBASIC18.69■□□□□ 0.58
C9orf139Q6ZV77 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.69■□□□□ 0.58
C9orf139Q6ZV77 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 AC005703.6-201ENST00000623265 1329 ntBASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 DUSP8P4-201ENST00000399538 1761 ntBASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C9orf139Q6ZV77 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf139Q6ZV77 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf139Q6ZV77 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf139Q6ZV77 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf139Q6ZV77 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf139Q6ZV77 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf139Q6ZV77 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf139Q6ZV77 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf139Q6ZV77 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 MIR935-201ENST00000401179 91 ntBASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 SRD5A1P1-201ENST00000442297 786 ntBASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 AC106739.1-201ENST00000617035 715 ntBASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
C9orf139Q6ZV77 AC091060.1-201ENST00000623524 1766 ntBASIC18.65■□□□□ 0.58
C9orf139Q6ZV77 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
C9orf139Q6ZV77 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf139Q6ZV77 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf139Q6ZV77 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf139Q6ZV77 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.65■□□□□ 0.58
C9orf139Q6ZV77 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf139Q6ZV77 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.65■□□□□ 0.58
C9orf139Q6ZV77 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
C9orf139Q6ZV77 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf139Q6ZV77 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf139Q6ZV77 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf139Q6ZV77 SLC6A10P-202ENST00000431994 2058 ntBASIC18.64■□□□□ 0.57
C9orf139Q6ZV77 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 AC131274.2-201ENST00000580697 1507 ntBASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C9orf139Q6ZV77 AC145676.1-201ENST00000514988 2004 ntBASIC18.62■□□□□ 0.57
C9orf139Q6ZV77 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf139Q6ZV77 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf139Q6ZV77 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
C9orf139Q6ZV77 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf139Q6ZV77 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf139Q6ZV77 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.62■□□□□ 0.57
C9orf139Q6ZV77 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.61■□□□□ 0.57
C9orf139Q6ZV77 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms