Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRFN4Q6PJG9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.67■□□□□ 0.9
LRFN4Q6PJG9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.67■□□□□ 0.9
LRFN4Q6PJG9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LRFN4Q6PJG9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRFN4Q6PJG9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRFN4Q6PJG9 AC090877.2-201ENST00000558441 1738 ntBASIC20.67■□□□□ 0.9
LRFN4Q6PJG9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRFN4Q6PJG9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
LRFN4Q6PJG9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LRFN4Q6PJG9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
LRFN4Q6PJG9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.66■□□□□ 0.9
LRFN4Q6PJG9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.66■□□□□ 0.9
LRFN4Q6PJG9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.66■□□□□ 0.9
LRFN4Q6PJG9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LRFN4Q6PJG9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LRFN4Q6PJG9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRFN4Q6PJG9 HLA-L-211ENST00000482052 1765 ntBASIC20.64■□□□□ 0.9
LRFN4Q6PJG9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
LRFN4Q6PJG9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRFN4Q6PJG9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.89
LRFN4Q6PJG9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.64■□□□□ 0.89
LRFN4Q6PJG9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.64■□□□□ 0.89
LRFN4Q6PJG9 AC022616.5-201ENST00000518796 181 ntBASIC20.64■□□□□ 0.89
LRFN4Q6PJG9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.64■□□□□ 0.89
LRFN4Q6PJG9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRFN4Q6PJG9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRFN4Q6PJG9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.64■□□□□ 0.89
LRFN4Q6PJG9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LRFN4Q6PJG9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
LRFN4Q6PJG9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
LRFN4Q6PJG9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.63■□□□□ 0.89
LRFN4Q6PJG9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN4Q6PJG9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
LRFN4Q6PJG9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LRFN4Q6PJG9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.63■□□□□ 0.89
LRFN4Q6PJG9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN4Q6PJG9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.63■□□□□ 0.89
LRFN4Q6PJG9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN4Q6PJG9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRFN4Q6PJG9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRFN4Q6PJG9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN4Q6PJG9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN4Q6PJG9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN4Q6PJG9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN4Q6PJG9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN4Q6PJG9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRFN4Q6PJG9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 LINC00543-201ENST00000567234 1845 ntBASIC20.6■□□□□ 0.89
LRFN4Q6PJG9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.59■□□□□ 0.89
LRFN4Q6PJG9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LRFN4Q6PJG9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN4Q6PJG9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.59■□□□□ 0.89
LRFN4Q6PJG9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN4Q6PJG9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
LRFN4Q6PJG9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN4Q6PJG9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRFN4Q6PJG9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.58■□□□□ 0.89
LRFN4Q6PJG9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRFN4Q6PJG9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms